Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1182 ATGGAAAGTGATGCCCAAGACACCTTTGGCTTATCCTCTTCATCTCCATCTTCTTCTTCTTCCTCTTTATCGTCAAACTCAGATTATGCAGGTACCAATAAGAGAGAATCAAGAGGTGTTTCAGATCAGAATGGTGATGATAGCTGCTGCAACAACAACAACAAGCAGATCAGAAGTGAAGAAAAGGATCATAATGAAAATAACAAGAATAATGATAATGATAAGCTTCCAGCTTACAGAGGTGTGAGAATGAGGAACTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAGAAATCCAGAATATGGCTTGGAACTTACCCTACGGCGGAAATGGCGGCTCGAGCTCACGATGTCGCGGCTTTAGCCATCAAAGGTGATTCGGCTTTCCTCAATTTCCCTCACTTGGCTTCGGAGCTTCCCCGACCGGCCACCACCGCCCCGAAGGACATCCAAGCCGCCGCCGCAAAGGCTGCAGCTACTGTCTTTGAGGTGTCAACTAATGATAAGCATTGTGATCAAGCCGAGGAGGCCGAGCTGGGCCGAACCGAGCGGGCCTCGTCATCGTCTTCGGCACAAGACCAGTCTTGTTGTTCTTCAAAGGAAGAGGACGCTGCTTTGTTTGACCTACCAGATCTTTTCACTGATGGCAACAATGGCCTTTGTTCTTATGCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTGGAATTTTTGTGCAGCGGATAGCGGTTTCAGGCTTGAAGAGCCATTTCTTTGGGAAAATTACTAG 771 0.4708 MESDAQDTFGLSSSSPSSSSSSLSSNSDYAGTNKRESRGVSDQNGDDSCCNNNNKQIRSEEKDHNENNKNNDNDKLPAYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGDSAFLNFPHLASELPRPATTAPKDIQAAAAKAAATVFEVSTNDKHCDQAEEAELGRTERASSSSSAQDQSCCSSKEEDAALFDLPDLFTDGNNGLCSYASASSSSSSSWNFCAADSGFRLEEPFLWENY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1182 256 MobiDBLite consensus disorder prediction 175 197 - -
Alju11g1182 256 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Alju11g1182 256 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Alju11g1182 256 Gene3D AP2/ERF domain 78 136 IPR036955 GO:0003700|GO:0006355
Alju11g1182 256 ProSiteProfiles AP2/ERF domain profile. 78 135 IPR001471 GO:0003700|GO:0006355
Alju11g1182 256 SMART rav1_2 78 141 IPR001471 GO:0003700|GO:0006355
Alju11g1182 256 FunFam Ethylene-responsive transcription factor 2 78 136 - -
Alju11g1182 256 MobiDBLite consensus disorder prediction 1 77 - -
Alju11g1182 256 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Alju11g1182 256 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 56 218 - -
Alju11g1182 256 MobiDBLite consensus disorder prediction 1 55 - -
Alju11g1182 256 MobiDBLite consensus disorder prediction 56 77 - -
Alju11g1182 256 Pfam AP2 domain 77 127 IPR001471 GO:0003700|GO:0006355
Alju11g1182 256 CDD AP2 79 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1182 Alju-ChrAlju11 15863975 15864745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1182 69 252 AP2-EREBP Transcription Factor Family AT2G44940 54.976 2.57e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju11g1182 AP2 6.3e-14 CL0081