Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1171 ATGCTTGGGGCCTCATGGGGGAAGGTGAATTGGGATGTGCAATGCTACTGCCGGGGAACGTGGGCTTGGAAATGGGAGGGAAATGGAAATAACCGCCTAAACCGTCACATAGAACTCGACAGAGAATACAAAACACACTCACACACAGAAACACAGACATTGTTCACGCAGAGACAGAGAGATTTGCAGAGAGAAATGCAAGTGAAGAAGAAGGATCAAGGGCCTATAAGGAAAGGGCCATGGAAAGCCGACGAAGACGAAGTGCTTCTAAGCCATGTCAACAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGCCTTCTTCAACGCACCGGAAAATCTTGCCGCCTCCGTTGGGTCAATAAGCTTCGACCAAATCTCAAGAATGGGTGCAAATTTTCGCTGGATGAAGAGAGGGTGGTGATTGAGATGCAGGCACAATTTGGGAACAAATGGGCAAAGATTGCGTCTTATTTGCCAGGAAGAACAGATAATGATGTTAAGAATTTCTGGAGTAGCAGGCAAAAGAGGATCGCTAGGATTCTACATTCTTCACCACCATCATCATACAAATCAAAATCCAACAGGAACAAAAATAAAGTCCCCTGTTTCCACAATGTTCCCCCTCTGGAGGCTCCCAAGTTTAGTTCTTCATCTGAGGAAGGATCTTCATTAAAGGCTAATCAGCCTCGCTCATCATCATCATCCTTTACTGAGAATTCAGAGGTCATAAAGATGGTGCCATTGCCTGATCTCATGAACTCCACCACCACCAACCCCTTGACGAGTTGTTCTGAGACGGTCACTTTGATCAAAGAAGAGTTTTCGACAACACCGTTCGAGAGCTACATGAGCGCCGACATCATAAGCTCAGGAATTGGTTTCCCTCAGATTTTCCCATTCTCAATGGAAAGTCAAGATCTCTTCTTGGCCAGAGCTAATGAGCCTGCTGGTTTCATTGATGGATTAGGTTTCGGAGGAGACCCTTTGGTTGATGATGCATCAGAACTTGGAATAGGAACACAGATTCCCTTTTTAGGGTTTCCAAATTTCTATGATCTGTCAGGAAGTTGCAGAATTGGGACAAGGGATTCAAATGGTAACAACCCCACAAACCCTGAAAGCTTCTTTGATGATTTTCCAGTTGATATGTTTGATCATCTTCAACCACCTCTAAGCCCACCATCATCATCAGAGCTGTGA 1209 0.4541 MLGASWGKVNWDVQCYCRGTWAWKWEGNGNNRLNRHIELDREYKTHSHTETQTLFTQRQRDLQREMQVKKKDQGPIRKGPWKADEDEVLLSHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFSLDEERVVIEMQAQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRIARILHSSPPSSYKSKSNRNKNKVPCFHNVPPLEAPKFSSSSEEGSSLKANQPRSSSSSFTENSEVIKMVPLPDLMNSTTTNPLTSCSETVTLIKEEFSTTPFESYMSADIISSGIGFPQIFPFSMESQDLFLARANEPAGFIDGLGFGGDPLVDDASELGIGTQIPFLGFPNFYDLSGSCRIGTRDSNGNNPTNPESFFDDFPVDMFDHLQPPLSPPSSSEL 402
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1171 402 MobiDBLite consensus disorder prediction 184 241 - -
Alju11g1171 402 CDD SANT 80 125 IPR001005 -
Alju11g1171 402 PANTHER TRANSCRIPTION FACTOR DUO1 69 398 - -
Alju11g1171 402 SUPERFAMILY Homeodomain-like 76 173 IPR009057 -
Alju11g1171 402 FunFam MYB transcription factor 78 130 - -
Alju11g1171 402 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Alju11g1171 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 129 IPR017930 -
Alju11g1171 402 MobiDBLite consensus disorder prediction 214 241 - -
Alju11g1171 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 181 IPR017930 -
Alju11g1171 402 Gene3D - 133 205 - -
Alju11g1171 402 Gene3D - 78 130 - -
Alju11g1171 402 CDD SANT 134 173 IPR001005 -
Alju11g1171 402 SMART sant 131 179 IPR001005 -
Alju11g1171 402 SMART sant 77 127 IPR001005 -
Alju11g1171 402 Pfam Myb-like DNA-binding domain 134 173 IPR001005 -
Alju11g1171 402 ProSiteProfiles Myb-like domain profile. 134 177 IPR001005 -
Alju11g1171 402 MobiDBLite consensus disorder prediction 187 203 - -
Alju11g1171 402 Pfam Myb-like DNA-binding domain 81 132 - -
Alju11g1171 402 FunFam Transcription factor GAMYB 133 205 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju11g1171 Alju-ChrAlju11 15190365 15194851 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1171 64 396 MYB Transcription Factor Family AT3G60460 46.667 2.10e-77 240
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju11g1171 Myb_DNA-bind_6 4.9e-11 CL0123