Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1170 ATGTTCATGAACTTAATTCCCAAAATCTTTCTCCGCCACATTTCTACCACCTCCACAACCACCACAAGGAAGCTCCTGAAATCCTCAAAAATCCCCAAAAGGTACCAAAAACTCGCTGTTCGTCAAGCCCAGAAAGTCCTCACCGATTACCTCCACGAAACTCGATGCTTACCTTTTGTATTTGCAGATCAGATTGGCAAAAACTCCCTCATTTCCCTCGTTAATCTCATTGTAAAGGTGGATTTCTCGGCCTCCGCTTTCTCGAGAAATTTCGAGAAATACCTCAGGTACCACCCCGTCAATGAGTTCGAATTTTTCTTTGAAAGCATAGGCATAGACTATAACAATGGCGTTTCTGGGTTGTTGCCTGTGAATAAGGTCTTCTTTTTTGAAGATGGCTCAATTCTGGATGCTGCTTGTGCGCTTTCAGGTTTTGGGTTTCCGTGGGATAAATTGGGTAAGTTGTATGAGGAATGTAGTTCCATTTTCAGGAGAAGTCCTGAAGCATTGAAATCTAAACTCTGTGAGTATAAGAAGTACGGGTTTGCTAATGTTGAAGTGGTTGGTATATGTCTAGCTTTCCCCAATATCTTAGGTGAGGAAGATCAATTTCATGGTGAAATTGATGGTCTGTTTACTGATCTGAAGTCAGTATTTTTAGATTTTGAATTGGCAAGATCTGTAGAAGAAAACATAGATTCTTGGCATGAAGTATGTAGAAAAATTCGAGTGTTCTATAATTTAAATGGTGAGAAGGGAAAGTTAGGGGAGCTCATGGGAAGGGCAAAAGCCATTTTTATTGAATATGGAGAAGATGAGTTGATTCGAAAGGCAGAGTATTTCTGTAGATTTGGTGTCAAAAAAGAGGAAGTAGCACTTTTACTTTTAAAAGCCCCAGAGTTGTTGAATCTTGATTTGCAGATTCCTTTGATTTGTGTGTCAAAGCTATTGAAACACTTAGGCTTGAGCCCTAAAATCCTGGAGGGTGTTAGTAAAAAATATGATCATGTATTGGGGACAAACAAGATGGATAATCTGCCTAATGTAATGAGAGCTTTGGATTTACATGAGTGGTTCTTCAAAAAAATGAAGGATGGAAATCATAACTTGTTATTAAGTTATCTTGCAAGCCATCCTAATGAAGACCAGGATGAAGAATATCAAGCTGGTTTAGAGAAAATTTGTTCTTCAAGATCCCAGAATCTTAGAATGAGGAAATTGAATTTCTTGCATGGCTTGGGCTTTGGAGAAAATGCTATAACCATAAATATTGCAGCTCGCTTGCATGGCAATAGGTGGGAGTTACAGAAAAGGTCTGAATTCTTTCTACATTTAGGGTTTGAATTCTCAGATCTCTGTATCATGGTGAAAAGAGCACCTAAAATTTTGAACCAGAAAACTCAAGTTACAGATAAGAAGGTGAAATTCTACTGTCAGGAGCTGGGAGTCCCTTTACAGTGTCTGACCCCTTGTCCTACTGCTTTGATTTATAATCTAGAGGACCGTATTAAGCCTAGGCACAGATTCCGTATATGGCTTAAAGAAAAGGGTCTGCTTGTAGAAAAGTATTCCATTGGAACTGTGACTTCTTGCAGCAGCAATCGTTTTGTAGATTTAGCTTATAAAATTCACCCAGCTGCCCCAAAACATTGGTTTGAACAATTCTATATACCTCCAAACACTCATCATTGTTATAATCATTAG 1704 0.3867 MFMNLIPKIFLRHISTTSTTTTRKLLKSSKIPKRYQKLAVRQAQKVLTDYLHETRCLPFVFADQIGKNSLISLVNLIVKVDFSASAFSRNFEKYLRYHPVNEFEFFFESIGIDYNNGVSGLLPVNKVFFFEDGSILDAACALSGFGFPWDKLGKLYEECSSIFRRSPEALKSKLCEYKKYGFANVEVVGICLAFPNILGEEDQFHGEIDGLFTDLKSVFLDFELARSVEENIDSWHEVCRKIRVFYNLNGEKGKLGELMGRAKAIFIEYGEDELIRKAEYFCRFGVKKEEVALLLLKAPELLNLDLQIPLICVSKLLKHLGLSPKILEGVSKKYDHVLGTNKMDNLPNVMRALDLHEWFFKKMKDGNHNLLLSYLASHPNEDQDEEYQAGLEKICSSRSQNLRMRKLNFLHGLGFGENAITINIAARLHGNRWELQKRSEFFLHLGFEFSDLCIMVKRAPKILNQKTQVTDKKVKFYCQELGVPLQCLTPCPTALIYNLEDRIKPRHRFRIWLKEKGLLVEKYSIGTVTSCSSNRFVDLAYKIHPAAPKHWFEQFYIPPNTHHCYNH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1170 567 Gene3D Transcription termination factor 3, mitochondrial 310 555 IPR038538 -
Alju11g1170 567 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 SMART mt_12 485 519 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 SMART mt_12 257 287 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 SMART mt_12 153 183 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 Pfam mTERF 145 351 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 Pfam mTERF 431 536 IPR003690 GO:0003690|GO:0006355
Alju11g1170 567 PANTHER CGI-12 PROTEIN-RELATED 165 538 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1170 Alju-ChrAlju11 15187771 15189474 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju11g1170 mTERF 1.1e-08 No_clan