Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1158 ATGACGAACCAGAACTTGGTTGTTCCTGATGTAAAATCACGTTTTAACACCATTGTTGAGGTGACTCTGTCCATTTCTAACTCACCTATGCTTACAAGCACGGTGCTTGGTGGGATTTTCGGAACAAAGTTACTGAAGAGGCTTGACGATGGAGGAGGAAAAGGTGGAGCCAAAGTCAATGCCTGGATTGATTCAATGAGAGCTTCCTCTCCCACACGAACCAAATCCTCCCTTCCTGTTTCTCAAGACCAACACTTGAGTTCTTGGGCTCTTCATCATCCTTCAGCCATCAGCATGTTTGATCAGATAATCAATAAGTCAACAGACAAGCAAATAGTAATCTTCGTCGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCTGATAAAGCATTCATGACTAAGAAGATGAGAGCAACAGTGAAGGATATAGCAAAACACTTCCCCACAGCTATCGTGAGTGGAAGGCGTAGAGACAAGGTTTACAACTTTGTGAGATTAGCAGAGCTGTACTATGCAGGCAGCCATGGCATGGACATCAAAGGACCGACAAAAAGCCAAGGATCTAAGAAAGGTAATCAGGCAGCCCCGTTCCAACCCGCAAGCCAGTTCTTGCCCATGATCAATGAGGTCTACAAGATCTTGCTGGAGAAAACAAAGTGTGTGGAAGGGGCTAAGGTTGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGCGTTGACGAAAAGAGCTGGGGTGCACTTGCGGAGCAAGTGCGACTAGTGCTGAATCAGTACCCAAAACTGAAGCTGACGGAAGGTAGAAAAGTGCTTGAGATCCGACCAACCATCAAATGGGACAAAGGCAAAGCTCTTGAGTTTTTGTTACGTTCGATTGGATTCGCCAATTGGAAGGATGTGTTTCCCATCTACATCGGGGATGACCGAACTGACGAGGATGCTTTTAAGGTGTTACGTAGGAGAGGCCAGGGGGCGGGAATTCTTGTGTCTAAAGTTGCCAAAGAAACAGAAGCTTCCTACACTTTACAGGACCCATCAGAGGTTGAGCAATTTTTGCGGCGTTTGGTAGACTGGAAAAGGGAGAGTAATGAGAGTGGAAGGAGAGTTGAGTAG 1119 0.462 MTNQNLVVPDVKSRFNTIVEVTLSISNSPMLTSTVLGGIFGTKLLKRLDDGGGKGGAKVNAWIDSMRASSPTRTKSSLPVSQDQHLSSWALHHPSAISMFDQIINKSTDKQIVIFVDYDGTLSPIVADPDKAFMTKKMRATVKDIAKHFPTAIVSGRRRDKVYNFVRLAELYYAGSHGMDIKGPTKSQGSKKGNQAAPFQPASQFLPMINEVYKILLEKTKCVEGAKVENNKFCLSVHFRCVDEKSWGALAEQVRLVLNQYPKLKLTEGRKVLEIRPTIKWDKGKALEFLLRSIGFANWKDVFPIYIGDDRTDEDAFKVLRRRGQGAGILVSKVAKETEASYTLQDPSEVEQFLRRLVDWKRESNESGRRVE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1158 372 Pfam Trehalose-phosphatase 115 348 IPR003337 GO:0003824|GO:0005992
Alju11g1158 372 NCBIfam trehalose-phosphatase 110 358 IPR003337 GO:0003824|GO:0005992
Alju11g1158 372 CDD HAD_TPP 113 350 - -
Alju11g1158 372 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 52 366 IPR044651 GO:0004805|GO:0005992
Alju11g1158 372 FunFam Trehalose 6-phosphate phosphatase 208 367 - -
Alju11g1158 372 FunFam Trehalose 6-phosphate phosphatase 112 198 - -
Alju11g1158 372 NCBIfam HAD-IIB family hydrolase 114 323 IPR006379 -
Alju11g1158 372 Gene3D - 205 371 IPR023214 -
Alju11g1158 372 Gene3D - 112 197 IPR023214 -
Alju11g1158 372 SUPERFAMILY HAD-like 113 360 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1158 Alju-ChrAlju11 15054135 15056077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1158 114 359 Trehalose Biosynthesis Gene Families AT1G70290 27.376 2.57e-11 63.2