Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1155 ATGACATCCTCCTACGTCTCGATTTCCGAAGACTTGATGGAAGATATGTTTGATATCAGTTTTACTGTCATTCAACGTGAGGTTTCACCTAACACGGGGCGCCTTCAAATGACACATTCTGAATTGTTTCCATCCCCATTCACCATGCCTTGTGAAGAATTACTTCGAGATGTTCCAAGTTTTCTACGTAGAAATGTAGGCAACAATCTTACAGAAAATGGTGTTGGCTCATTAGCAACTCATATCATATCTTACTACCAAGAAGTACTCAACCGTTTCAGCATTAGAAGTACTCATCACCGCTTAATACCTCTAATTGTGTATCTTAATGTTGATACATCTGACCATGGCTCAATACCTTTGTTTTTTCATCTTCAAACTACCGCTCTGTATGGAGACAATGAATACATTGAGTATATGACAGATATTATTGGCGATGATGATGAGTCAATAGAAATCTATAGTGCCATGGGCTCATCCGATCAACAATCTTCTGCAAACGATGATATTGAGTCAGCAGAAACCAATCAACTGATAGAGCAATCTATGCAGCACTTCTTCATGGTTCCAGCAACAGAGAAAGCTATGGCATCACTCAAGAAGATGGAAAAGTTTGCTGATGATGATATAAAGACAAGCACATGTAGCATTTGCTTAGAAGCTTTTAATGATGTGGACGGCGACGACGTTTCAGCACTGCCTTGTGACCATTTTTTCCACAATGATTGCATTGTAGGATGGCTAAAAACAGGCCATACATGCCCATTGTATCGCTTTCAGTTGGCTATGTAA 792 0.3965 MTSSYVSISEDLMEDMFDISFTVIQREVSPNTGRLQMTHSELFPSPFTMPCEELLRDVPSFLRRNVGNNLTENGVGSLATHIISYYQEVLNRFSIRSTHHRLIPLIVYLNVDTSDHGSIPLFFHLQTTALYGDNEYIEYMTDIIGDDDESIEIYSAMGSSDQQSSANDDIESAETNQLIEQSMQHFFMVPATEKAMASLKKMEKFADDDIKTSTCSICLEAFNDVDGDDVSALPCDHFFHNDCIVGWLKTGHTCPLYRFQLAM 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1155 263 CDD RING-H2_PA-TM-RING 214 258 - -
Alju11g1155 263 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 161 261 - -
Alju11g1155 263 ProSiteProfiles Zinc finger RING-type profile. 215 258 IPR001841 -
Alju11g1155 263 Pfam Ring finger domain 214 256 IPR001841 -
Alju11g1155 263 SUPERFAMILY RING/U-box 201 256 - -
Alju11g1155 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 262 IPR013083 -
Alju11g1155 263 SMART ring_2 215 257 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju11g1155 Alju-ChrAlju11 15023592 15024383 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1155 168 261 C3H Transcription Factor Family AT1G18760 38.298 1.10e-12 63.9