Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1148 ATGAGTCGCAGGGTGAGGAGGAAGGTTGCAAGAAAAGGAAAAGAGGTGGTGGTCTTGCCAAGTTACCCTGAAATTCGAGATGAAGTCTCGGATTCAGAGCCTGAACGGGTTGTTGATTGGAGGGGCTTGCCTGATGACACAGTAATTCAACTGTTTTCATTTCTTAGTTATCGTGACCGAGCAAGCTTATCATCAACTTGTAGGATATGGAGGCTTCTTGGTAGCTCTCCATGTCTATGGACTTCTCTTGATCTTCGCTCTCACAGGTTTGATGCCGCCATGGCCTCTTCACTTGCTTCAAGGTGTGTGCGTCTTCAGAAGCTTAGATTTCGTGGGGCTGAATCTGCTGATGCTATAATTCATCTTCAAGCCAGGAATTTGCGTGAAATAAGTGGTGACTACTGCAGGAAGATTACTGATGCCACCCTTGCAGTAATTGTGGCCCGGCATGAGTTGCTTGAGAGCCTTCTGCTTGGTCCGGATTTCTGTGAAAGAATCAGCAGTGATGCGATAAAAGCAATTGCTCATTGCTGTCCTAGGTTAAGGAGACTCAGACTCTCAGGCATTAGGGATGTAAGTTCTGATGCCATTAATGCATTGAGCAAGTATTGTCCCAATTTGACTGATATTGGATTCATTGACTGTTTGAATGTTGACGAGCTAGCATTGGGAAATGTGTTATCAGTTCATTTTCTTTCCGTTGCTGGGACGTCTAGTATGAATTGGGGTGTAGTTTCTCATCTCTGGCATAAGCTGCCTAACCTTACTGGAATAGATGTTTCAAGAACTGATATTGGTCCATCTACTGTTTCAAGATTGTTGTCATCACAGAGCTTGAAAGTTTTGTGTGCTCTAAATTGTCCAATACTTGAAGAAGACACCAGCTTCTCCACAAGTAAATACAAAAACAAGCTTTTAATTGCCCTTTCTAATGATATTTTTAAAGGACTGGCCTCTTTATTTTTTGATGATACAAGGAATGGCAAAAATGTGTTTTTGGACTGGAGGAGCGTTAAGAACAATAATAAGGATTTAAATGAACTTATGATCTGGCTTGAGTGGATCCTATCCCATACACTTCTGCGATCAGCTGAGAGCTCTCAACAGGGCCTGGAAAATTTCTGGGTTGAACAAGGTGGAGCACTCTTGCTTAGTCTAATGCAGAGTCCACAGGAGGATGTTCAGGAAAGGGCAGCTACAGGTCTTGCAACGTTTGTTGTAATTGATGATGAAAATGCTAGCATTGACTGTGGAAGGGCTGAAGCAGTCATGCGAGATGGTGGCATACGGCTACTTCTTTGCTTGGCAAAATCATGGAGGGAAGGGCTTCAATCCGAGGCAGCTAAGGCCATTGCAAATTTGTCTGTCAATGCCAATGTTGCAAAAGCTGTTGCAGAAGAAGGGGGAATTGATATTCTCGCTGGTTTGGCTAGATCCATGAACAAGCTGGTGGCAGAAGAGGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGTGCAATTGCTGCTGCTGGTGGAATACGAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCCAGTGGGGATGGAGTTTTGGAACGTGCAGCTGGTGCATTAGCTAATTTGGCAGCTGATGACAAGTGTAGTACAGAAGTTGCACTGGCTGGTGGTGTACATGCTTTAGTAATGCTTGCGCGTAGCTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTGGCTGCTCATGGAGATAGCAACAGCAACAATGCTGCTGTTGGACAAGAAGCAGGGGCTCTGGAGGCACTTGTTCAACTTACACGCTCTCCTCACGAGGGTGTCAGGCAAGAAGCTGCTGGTGCGCTTTGGAATTTGTCATTTGATGACAGGAATCGAGAAGCCATTGCAGCAGCTGGTGGAGTTCAGGCCTTGGTTGCTCTTGCACAATCTTGTTCTAACGCGTCCCCTGGACTTCAAGAGAGAGCTGCTGGTGCTCTCTGGGGATTATCAGTTTCTGAAGCCAATAGCATTGCAATTGGACGAGAAGGAGGTGTTGCACCCTTGATTGCACTGGCGCGGTCTGAAGCTGAGGATGTTCATGAGACTGCTGCAGGAGCACTATGGAATCTTGCTTTTAACCCTGGTAATGCTCTACGTATTGTCGAGGAAGGAGGAGTCTCTGCTCTTGTTGATCTCTGTTCTTCATCATTATCAAAGATGGCACGTTTCATGGCCGCATTGGCATTGGCTTACATGTTTGATGGGAGAATGGATGAATTTGCTTTGGTAGGAACCTCATCAGAAAGCATCTCCAAGAGTGTGAGCTTGGATGGAGCTAGAAGGATGGCTTTGAAACACATTGAAGCTTTCATCCTTATGTTTTCTGATCAGCAAGCATTTGCTGCTGCTGCTACTTCAACAGCCCCTGCAGCATTGGCTCAGGTTTCTGAAGGCGCACGAATCCAGGAAGCGGGACATCTTAGATGCAGTGGCTCTGAAATTGGAAGATTTGTTGCTATGCTACGAAATCCATCATCTATACTAAAAGCTTGTGCTGCATTTGCTCTTCTACAGTTTACAATTCCTGGTGGGCGACACGCCATGCACCATGCCAGCCTCATGCAGAATGCATGCGCGGCAAGAGTTCTCCGTGGGGCGGCAGCCTCGGCAACCGCCCCGCTTGAAGCGAAAATATTCGCCAGAATCGTTCTCCGCAACCTTGAGCATCACCAGACAGATCTGCAAACTATCTAG 2757 0.4628 MSRRVRRKVARKGKEVVVLPSYPEIRDEVSDSEPERVVDWRGLPDDTVIQLFSFLSYRDRASLSSTCRIWRLLGSSPCLWTSLDLRSHRFDAAMASSLASRCVRLQKLRFRGAESADAIIHLQARNLREISGDYCRKITDATLAVIVARHELLESLLLGPDFCERISSDAIKAIAHCCPRLRRLRLSGIRDVSSDAINALSKYCPNLTDIGFIDCLNVDELALGNVLSVHFLSVAGTSSMNWGVVSHLWHKLPNLTGIDVSRTDIGPSTVSRLLSSQSLKVLCALNCPILEEDTSFSTSKYKNKLLIALSNDIFKGLASLFFDDTRNGKNVFLDWRSVKNNNKDLNELMIWLEWILSHTLLRSAESSQQGLENFWVEQGGALLLSLMQSPQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLCLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAAAGGIRALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVSALVDLCSSSLSKMARFMAALALAYMFDGRMDEFALVGTSSESISKSVSLDGARRMALKHIEAFILMFSDQQAFAAAATSTAPAALAQVSEGARIQEAGHLRCSGSEIGRFVAMLRNPSSILKACAAFALLQFTIPGGRHAMHHASLMQNACAARVLRGAAASATAPLEAKIFARIVLRNLEHHQTDLQTI 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1148 918 PANTHER PROTEIN ARABIDILLO 1 1 915 - -
Alju11g1148 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 584 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 675 712 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 499 541 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 552 583 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 629 671 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 462 496 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 591 627 IPR000225 GO:0005515
Alju11g1148 918 Pfam Armadillo/beta-catenin-like repeat 421 455 IPR000225 GO:0005515
Alju11g1148 918 Gene3D Ribonuclease Inhibitor 33 314 IPR032675 -
Alju11g1148 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 509 554 IPR000225 GO:0005515
Alju11g1148 918 Gene3D - 355 520 IPR011989 -
Alju11g1148 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 599 641 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 498 541 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 416 456 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 588 628 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 542 583 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 629 672 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 457 497 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 714 755 IPR000225 GO:0005515
Alju11g1148 918 SMART arm_5 673 713 IPR000225 GO:0005515
Alju11g1148 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 684 726 IPR000225 GO:0005515
Alju11g1148 918 FunFam Protein ARABIDILLO 2 354 501 - -
Alju11g1148 918 Pfam F-box-like 41 86 IPR001810 GO:0005515
Alju11g1148 918 SUPERFAMILY ARM repeat 381 743 IPR016024 -
Alju11g1148 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 640 685 IPR000225 GO:0005515
Alju11g1148 918 SUPERFAMILY RNI-like 40 292 - -
Alju11g1148 918 SMART fbox_2 43 83 IPR001810 GO:0005515
Alju11g1148 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 468 510 IPR000225 GO:0005515
Alju11g1148 918 Gene3D - 589 759 IPR011989 -
Alju11g1148 918 Gene3D - 521 588 IPR011989 -
Alju11g1148 918 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Alju11g1148 918 SMART LRR_CC_2 124 149 IPR006553 -
Alju11g1148 918 SMART LRR_CC_2 204 229 IPR006553 -
Alju11g1148 918 SMART LRR_CC_2 178 203 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1148 Alju-ChrAlju11 14880789 14901615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1148 555 757 U-box Gene Family AT2G23140 35.294 4.91e-20 93.6