Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1146 ATGAGAGCTTCAGGATCTGTTCTCATGCCGGAAACTGGGTTTTTTCACCGGAAAATTGGTATGACAACTTCAGGATCTGGTATAAAGAGAGAGAGAATGGTGGTGATGTTGAATGGAGTGGATATTTGCCCGATGGTGAAGAAGAGGCATGGTGGAAATTGGAAGGAAGGTCGCTGGTCAGCTGTTCACATCTGCCCTGTTTCACCCGCGGTGAAGAAGAGGCATGGCTCTCTCTCTCTCTCTCTCTTCGGGTGTAGTTGCAGAGTGGTTAACGGTGGTTTTCACTGGTGGTCTGGAAAAATAGAGTGCGCCCAGCAGAGTCGAACCCTTTTGGATTCAAAAGAGATGGCTGGACAATCTGATCCTCACCTCTCTCTGTTTTCAGCTGAAGAGCTTGAATTTGTGGCGGAGGATGACATGGTTGAGATTGTACCCAATCTCAAAATGGATGCTCTCAATCTGATAAGTGGAGATTTTGGTCCATTTGCCCCCCAAATAGCTACTCAAGTGCCTTTGTGGTTGGCTGTGGCTTTGAAGAAGAGAGGAAAATGCTCTATTCGCCGTCCTGAATGGATGTCAGTTGATAATTTAACTCAAGTTCTGGAGGCTGAGCGAGAATCTCAGGAAATGTCTGAAAAATTACCGTTTCATTATGTAGAAATCTCAAGACTTCTCTTTGATCATGCACGAGATGACATTCCTGATGTATATATGGTGAGGTCTCTAATTGAGGACATACGAGATGTAAGATTTCATAAAGTAAGGACTGACTTAGAGGCATTCAATGGTCGTACAATTGCTGTCAAGATTAAGAATTTGTCGGCGATGGAGGTGAATATCGTTCGCCCATTTATTAGAAGAGCTTTACAGGCATTTTGTAAGCATGATAGTCCAGAGTTGATACCAGAACCAGAGAGAGTGGCTGACAAACGTCCACAAGTAGTCAACAATGCTCCAAGAGCAATTGCGACGATGATGATCAACAACTCATCGAATATCATAACCAATGGCATGTGGCTGGCTTTGAGGTGCTTGCATCTGAACGTGTCTTTACTACTGTGTTCATCATCATGTATTGGGGATCTTGAGCTGACTCCACATAGAATATTGCTGTTATCTCTGTAA 1125 0.4391 MRASGSVLMPETGFFHRKIGMTTSGSGIKRERMVVMLNGVDICPMVKKRHGGNWKEGRWSAVHICPVSPAVKKRHGSLSLSLFGCSCRVVNGGFHWWSGKIECAQQSRTLLDSKEMAGQSDPHLSLFSAEELEFVAEDDMVEIVPNLKMDALNLISGDFGPFAPQIATQVPLWLAVALKKRGKCSIRRPEWMSVDNLTQVLEAERESQEMSEKLPFHYVEISRLLFDHARDDIPDVYMVRSLIEDIRDVRFHKVRTDLEAFNGRTIAVKIKNLSAMEVNIVRPFIRRALQAFCKHDSPELIPEPERVADKRPQVVNNAPRAIATMMINNSSNIITNGMWLALRCLHLNVSLLLCSSSCIGDLELTPHRILLLSL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1146 374 CDD GINS_B_Psf2 128 189 - -
Alju11g1146 374 Gene3D - 193 300 - -
Alju11g1146 374 FunFam DNA replication complex GINS protein PSF2 193 308 - -
Alju11g1146 374 SUPERFAMILY GINS helical bundle-like 189 296 IPR036224 -
Alju11g1146 374 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 121 318 IPR007257 GO:0005634|GO:0006260
Alju11g1146 374 FunFam DNA replication complex GINS protein PSF2 127 192 - -
Alju11g1146 374 SUPERFAMILY PriA/YqbF domain 127 186 - -
Alju11g1146 374 Gene3D - 127 192 - -
Alju11g1146 374 Pfam GINS complex protein 168 277 IPR021151 -
Alju11g1146 374 CDD GINS_A_psf2 181 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1146 Alju-ChrAlju11 14863617 14873450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1146 116 262 Core DNA Replication Machinery Family AT3G12530 73.469 4.77e-78 235