Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1136 ATGTCGGCCTCATCATCATCCACTTCTTCCTTTTCACCGGACCACCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCCATTTCTGTGACACTGTTCTCGCGGTGAGTGTTCCTTGCACCAGCATGTTCAAGACTGTTACTGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTTAATATGCGTGGCCTTCTTCTTCCTTCTTCCAATCAGCTTCACCTCGGTCACACAATCTTCCCTCCTCAGAATCTCCTGGAGGAGATTCGAAATGCACCATCTTCAAACATACAGATGATGGGCCATTATCATCAGCTTCCACAACCAAATGACTCAGTTATGATCAGCACCATGCGAGCAGGAGGACTCGAGGAAATCCCTAAACCTCCACCACCACCAGCTAATAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGACGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCTCACATACACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTGCGCCAGGAAGGAGAAGCCGTGCTTATGAAAGAGGGGTATTTGGGACCCACAAACGTAGATATATTCTCTTTTGCCTCTGTTTCTTGTGTTGTGTGTCGTCGTCGTTACTTCTTTTAG 723 0.4827 MSASSSSTSSFSPDHHLSPSDQLCYVHCHFCDTVLAVSVPCTSMFKTVTVRCGHCTNLLSVNMRGLLLPSSNQLHLGHTIFPPQNLLEEIRNAPSSNIQMMGHYHQLPQPNDSVMISTMRAGGLEEIPKPPPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEAVLMKEGYLGPTNVDIFSFASVSCVVCRRRYFF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1136 240 MobiDBLite consensus disorder prediction 126 140 - -
Alju11g1136 240 Gene3D High mobility group box domain 131 186 IPR036910 -
Alju11g1136 240 Pfam YABBY protein 19 190 IPR006780 GO:0007275
Alju11g1136 240 PANTHER PROTEIN YABBY 6-RELATED 5 202 IPR006780 GO:0007275
Alju11g1136 240 CDD HMG-box_SF 144 180 - -
Alju11g1136 240 FunFam Axial regulator YABBY 135 207 - -
Alju11g1136 240 SUPERFAMILY HMG-box 130 184 IPR036910 -
Alju11g1136 240 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1136 Alju-ChrAlju11 14637291 14641596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1136 30 223 C2C2-YABBY Transcription Factor Family AT4G00180 61.244 3.78e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju11g1136 YABBY 1.1e-71 CL0114