Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1113 ATGGAAAAGGCACCACACTGGATTCTATGGTTCGTATTGATCCAACTTTTCTTGCTTGGCAACGCGCACCCTGGTTTCATAAGCATTGACTGTGGAGAAAGTAGTGAATACACTGACCCACAAACTGGAATCTCGTATCAGACAGACATAGGTTTCGTAGAAACAGGAATAAATAAGAGGGTAGCAGTTGAAGAAAGGTATGAAGTAGATTATGCTCTTTTTGGAAGACAACTTCAGACACTGAGAAGTTTCCCAGAAGGAAAAAGGAATTGCTATACCCTGAACCCAAGACAGGGCAAAAACAACAATTACCTCATAAGGGCTTTCTTCGCATATAAAAATTATGATGCCAAAAATCAAACTCCATCTTTTGACTTGTACCTCAATGTCGACTTTTGGCGAACTGTGGATTTGGATTATACTGTTGATTATCAATATTCAGAGATTATCCATACTCCAAAAACTGACACCATACATGTTTGCCTTGTCAACACTGGCAGAGGAACACCTTTCATTTCTACACTGGAACTGCGACCCCTTGCCAATTCTATTTATAATCTAACTCCATCCCCTTCTCAATCACTATTGGTCTTTGATACGAGAATTGATGTTGGTTCCAATCAGACTTCAGACTTGTTTAAAAGGTTTAAGGATGACATCTATGATCGTCTGTGGCGAGAGGACGATATTTTTGATAATAAAGGTTCGCGAAAGTTCAATGGGCCGTCGGAAGATATTGATGCTGGAAGCATAAACGATTCTTATAAATTACCCACAGAAGTGCTTATGTCTGCGACCAAATCGTTGAATCTCTCCTTTGATTTAAACCTTGACTATGACTCTATCTGGAAGACACCAACTGAAAAGTCTTTCAGATATTATGTCATCTTTCACTTTTTGGAAATTGAGAAGCTTCCCACTGGACAAAAGAGAGTAATTGATGTTACTGTTAATGACAAAAATATCCATCCAGAGGCGCCGTTAACTCTCGAATACTTAAAGCCAGTGACAGTTACAAGTGTGACATATCAAGATGGTCTTTTTTTCAACATAAGTGCAACATCAGAATCTGATGCTCCTCCAATCCTTAATGCTATAGAAACTTACAAAATCATATCATCACTAGCATCTCCAACAGACCAAACAGATGCGGATGCCATTCTGGAAATAAAAAACACATACGGAATCCCCAAAGTAGATTGGCAAGGTGACCCATGTGTTCCAGCGGAATTTTCATGGGAGGGACTTGGTTGCAGATATGGCATCAATAAGGCTAACGCAAGGATTATCTCACTAAACTTGAGCGCCAGCAAGTTAAGAGGACAAATAGCTCCTTCATTTTCACAACTTACGGAGTTAAAGTATTTGGATTTATCAAGCAATGACTTGTCAGGATCCATACCAGAATTTCTTGCTAAATTGCCAAATTTGATAATCCTTAATTTGAGTGGCAACAGGCTTACAGGTTCAGTTCCCAAGGCTCTTAAAGAAAAGTCAGGATTGGAAATGAGCTTGGATGATAATCCTAGTCTTTGTTTGAGGGATCCATGCCAGAAGCACAAGTTCCTTATTCCACTTATAGCATCTGTTTCAGCTTTGACTGTTGTAATCTTGATTTCTCTAGGAATTTGGATCTTCAAAATCAAAAAACTGAAAGTTTCTACAAAGCAAAACGCAATAGAACTAAGAAATCGTGCTTATTCTTACACCGATGTCCTTGAGATCACTCATAACTTACAACACTTGATTGGAGAAGGTGGATTTGGCAAAGTTTATTTAGGCACCCTTAACAATTGCACTCAAGTTGCAGTGAAGTTACTTTCTCATTCATCAGTGCAAGGTCATAGAGAATTTCGATCAGAGGTGGAACTTTTGATGGTTATTCATCATAGACACTTAGTTTCTCTTATTGGATATTGCGAAGAAAGTGACGTCAGGGCATTAATATATGAATATATGCCTAATGGGAACCTCCATCATCATTTATCAAGTACTAAAGGAGGTGCATTGAAATGGAAAGATCGGCTTCAAATTGCATTGGAGGCAGCGTATGGATTGGATTATTTACACAATGGTTGTAAGCCTGCAATTGTGCACAGAGACCTTAAGGCCTCCAACATCTTGCTGGACAGGAATATGGAGGCTAGGATTGCTGACTTTGGATTGTCTAGAGCTTTTGCAAATGATTTTGATACTCATCTCTCAACTCGTCCTGCTGGAACAATTGGTTACCTTGATCCTCAATTTCAAAATTCTGGGAACCTTACAAAAGGGAGTGATGTCTACAGTTTTGGAATAATTCTGCTAGAATTAGTGACTGGAAAACCAGCAGCAAAAAGACTACCAAATAATACCTTCACTCTCCTACTTGAATGGGTCACCCGTAAACTTGGACGCAAGGATGATATCAAGTCCATTATTGATCCAAGGTTACAAGGACAATACTGTCTTGATTCTGCTGTGAAATTTGTAGAGGTAGCCAAGTCATGCACAGGACCACTAGCAATTCAAAGGCCTGATATAAGTCAAGTAGTAGTTGAACTAAGGGAATGCTTGGCAATGGAGATAAGAATTGACGGGACTAGTCACAACACCAATTCAAGCAGTTCCTTGGATATGAGTACTTTGCAATTTGATTCAAGCTTTAGTGCTCTATCTGCTAGATAG 2667 0.3918 MEKAPHWILWFVLIQLFLLGNAHPGFISIDCGESSEYTDPQTGISYQTDIGFVETGINKRVAVEERYEVDYALFGRQLQTLRSFPEGKRNCYTLNPRQGKNNNYLIRAFFAYKNYDAKNQTPSFDLYLNVDFWRTVDLDYTVDYQYSEIIHTPKTDTIHVCLVNTGRGTPFISTLELRPLANSIYNLTPSPSQSLLVFDTRIDVGSNQTSDLFKRFKDDIYDRLWREDDIFDNKGSRKFNGPSEDIDAGSINDSYKLPTEVLMSATKSLNLSFDLNLDYDSIWKTPTEKSFRYYVIFHFLEIEKLPTGQKRVIDVTVNDKNIHPEAPLTLEYLKPVTVTSVTYQDGLFFNISATSESDAPPILNAIETYKIISSLASPTDQTDADAILEIKNTYGIPKVDWQGDPCVPAEFSWEGLGCRYGINKANARIISLNLSASKLRGQIAPSFSQLTELKYLDLSSNDLSGSIPEFLAKLPNLIILNLSGNRLTGSVPKALKEKSGLEMSLDDNPSLCLRDPCQKHKFLIPLIASVSALTVVILISLGIWIFKIKKLKVSTKQNAIELRNRAYSYTDVLEITHNLQHLIGEGGFGKVYLGTLNNCTQVAVKLLSHSSVQGHREFRSEVELLMVIHHRHLVSLIGYCEESDVRALIYEYMPNGNLHHHLSSTKGGALKWKDRLQIALEAAYGLDYLHNGCKPAIVHRDLKASNILLDRNMEARIADFGLSRAFANDFDTHLSTRPAGTIGYLDPQFQNSGNLTKGSDVYSFGIILLELVTGKPAAKRLPNNTFTLLLEWVTRKLGRKDDIKSIIDPRLQGQYCLDSAVKFVEVAKSCTGPLAIQRPDISQVVVELRECLAMEIRIDGTSHNTNSSSSLDMSTLQFDSSFSALSAR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1113 888 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 653 855 - -
Alju11g1113 888 ProSitePatterns Protein kinases ATP-binding region signature. 583 605 IPR017441 GO:0005524
Alju11g1113 888 PANTHER OS07G0107800 PROTEIN-RELATED 27 856 - -
Alju11g1113 888 Gene3D - 200 371 - -
Alju11g1113 888 FunFam Leucine-rich repeat receptor-like protein kinase 553 652 - -
Alju11g1113 888 Gene3D Transferase(Phosphotransferase) domain 1 654 869 - -
Alju11g1113 888 Pfam Protein tyrosine and serine/threonine kinase 579 791 IPR001245 GO:0004672|GO:0006468
Alju11g1113 888 SUPERFAMILY Protein kinase-like (PK-like) 564 848 IPR011009 -
Alju11g1113 888 ProSiteProfiles Leucine-rich repeat profile. 452 475 IPR001611 GO:0005515
Alju11g1113 888 Gene3D Ribonuclease Inhibitor 382 512 IPR032675 -
Alju11g1113 888 SUPERFAMILY L domain-like 386 509 - -
Alju11g1113 888 PRINTS Leucine-rich repeat signature 453 466 - -
Alju11g1113 888 PRINTS Leucine-rich repeat signature 474 487 - -
Alju11g1113 888 SMART serkin_6 577 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1113 888 Pfam Malectin-like domain 29 371 IPR024788 -
Alju11g1113 888 FunFam Leucine-rich repeat receptor-like kinase 382 513 - -
Alju11g1113 888 Gene3D Phosphorylase Kinase; domain 1 583 653 - -
Alju11g1113 888 ProSiteProfiles Protein kinase domain profile. 577 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1113 888 CDD STKc_IRAK 583 848 - -
Alju11g1113 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Alju11g1113 888 Pfam Leucine rich repeat 431 487 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1113 Alju-ChrAlju11 13984608 13992677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1113 11 875 Receptor kinase-like Gene Family AT2G19230 43.101 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju11g1113 Malectin_like 2.9e-86 CL0202