Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1100 ATGGCTCTCACCCTCCAACTTGTTCAACATCCATTATTCCCTTTGTACTTTGTCTCTCTCTCACTTTTCTTCTCCATTTTCATGGTCACTCCTTCCACTTGCTTCACTCCCAGAAAGCTCCCTAATGCTTCTTCTTACTCCCCTTCTGGCTCAGATTGGTCTCCGGCCGAGGCCACTTGGTACGGCAGCCCCACCGGCGCCGGAAGTGATGGGGGTGCATGTGGATATGGTAGTGCCGTGGAGCAACCTCCATTTGCTTCGATGATATCGGCGGGAGGGCCTTCTCTGTATGAATCAGGCAAAGGCTGTGGAGCTTGTTTTGAGGTGAAGTGCACTGAGAATGCTGCGTGCTCCGGCAACCCAGTGGAGGTGGTGATCACCGACGAGTGTCCTGGCTGTGGCTCGCCTGACAAAGTTCACTTCGATTTGAGCGGCACAGCCTTCGGCGCCATGGCTGTTTCCGGTCAGGCTCAGAAGCTACGCGACGCTGGCATTCTGCAGATTCAACACAGAAGAGTGAAATGCAACTATCGTGGCACGTCATTAGCGTTCCACGTGGACGCGGGCTCCAACGCCAACTACTTCGCATGTTTGATAGAGTACGAGGACGGAGACGGAGACCTGGCCAAGGTGGAACTGAAGGAGGCTCTGGATTCTGCCACGTGGACTCCGATGCAACAGTCTTGGGGCGCCGTCTGGAAGCTCAACGCGGGCTCGCCGCTCAAAGCCCCCTTCTCCCTCCGCCTCACCACCGTCGAGTCCGGCCTCACTCTGGTGGCAAACAACGTCATCCCCGCCGGTTGGACCCCCGGCCAGACTTACCGATCACCACTCAATTTTCAGACCTAG 849 0.5642 MALTLQLVQHPLFPLYFVSLSLFFSIFMVTPSTCFTPRKLPNASSYSPSGSDWSPAEATWYGSPTGAGSDGGACGYGSAVEQPPFASMISAGGPSLYESGKGCGACFEVKCTENAACSGNPVEVVITDECPGCGSPDKVHFDLSGTAFGAMAVSGQAQKLRDAGILQIQHRRVKCNYRGTSLAFHVDAGSNANYFACLIEYEDGDGDLAKVELKEALDSATWTPMQQSWGAVWKLNAGSPLKAPFSLRLTTVESGLTLVANNVIPAGWTPGQTYRSPLNFQT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1100 282 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 180 IPR007112 -
Alju11g1100 282 SUPERFAMILY PHL pollen allergen 181 276 IPR036749 -
Alju11g1100 282 Gene3D - 37 176 IPR036908 -
Alju11g1100 282 PRINTS Expansin/Lol pI family signature 262 276 IPR007118 GO:0005576
Alju11g1100 282 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Alju11g1100 282 PRINTS Expansin/Lol pI family signature 93 111 IPR007118 GO:0005576
Alju11g1100 282 PRINTS Expansin/Lol pI family signature 222 236 IPR007118 GO:0005576
Alju11g1100 282 PRINTS Expansin/Lol pI family signature 52 67 IPR007118 GO:0005576
Alju11g1100 282 PRINTS Expansin/Lol pI family signature 163 179 IPR007118 GO:0005576
Alju11g1100 282 Pfam Expansin C-terminal domain 183 265 IPR007117 -
Alju11g1100 282 CDD DPBB_EXPB_N 53 175 - -
Alju11g1100 282 Gene3D - 177 281 IPR036749 -
Alju11g1100 282 SMART dpbb_1 89 170 IPR007112 -
Alju11g1100 282 PRINTS Major pollen allergen Lol pI signature 91 102 IPR005795 GO:0005576|GO:0019953
Alju11g1100 282 PRINTS Major pollen allergen Lol pI signature 111 121 IPR005795 GO:0005576|GO:0019953
Alju11g1100 282 PRINTS Major pollen allergen Lol pI signature 200 215 IPR005795 GO:0005576|GO:0019953
Alju11g1100 282 PRINTS Major pollen allergen Lol pI signature 184 199 IPR005795 GO:0005576|GO:0019953
Alju11g1100 282 PRINTS Major pollen allergen Lol pI signature 152 167 IPR005795 GO:0005576|GO:0019953
Alju11g1100 282 PRINTS Major pollen allergen Lol pI signature 231 248 IPR005795 GO:0005576|GO:0019953
Alju11g1100 282 PANTHER EXPANSIN-B3 28 279 - -
Alju11g1100 282 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 193 276 IPR007117 -
Alju11g1100 282 SUPERFAMILY Barwin-like endoglucanases 43 179 IPR036908 -
Alju11g1100 282 Pfam Lytic transglycolase 90 169 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1100 Alju-ChrAlju11 13764893 13766768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1100 34 280 Expansin Gene Family AT1G65680 64.372 3.67e-120 343