Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1084 ATGGCCACCGCCTCCGCCGTCCTCCTCCTCCTGCTCCTCTCGGCCTCCTCCATCTCCTCCGTCTTCGGTGGTGGCCGTGAAATGGAGCTGCTTCGGCTGGCTCACACCCAAGTTGTTGAAGCTAGGACTTGGGTTAAGAGTCTTCATCATCATCAGCAGAGTGGCGTTAACGTCGCAAGCTCAATGCTTCCAACGTGGTCGCCGCCGGCCATGGCGGTGGGTGTGGCGCTCGGAGACTGTGCTAAGCTGTATGAAGAGAGTGAGCAGAGGATGAATGAGTTGGTATCAAAGGCTGGTGATGGTGTAAGTTGGTGGGTGAGTAGTGTAATGAGTAACCATAGGACTTGTTTGGATGGGTTGAAAGAAAAAGGGTACGACGTGGAAGCTGAGGGGGGATTGCATAAGAACTTGACTTTATCGCTTCAAGAGGTTCTTCACTTATTAGTGAAGAACAACCACAGAGTCAAAGCAAAGGCGAAAAGAGCGCCACTAAAGGGAAACATATCCAAATCATACGGTGGCTTATTGACGTCATGGAATCCGACCAAGTCAGGGGCACATTTCACGGTGGCTCAGGATGGTTCCGGCAACCACAGAACGATCGGAGCCGCCATGGAAGCAGTGAGTTCAATGGATCACAATCGTCCCAAAAGAGTCATCATCCACGTCAAATCAGGAATCTACAACGAGAAGGTCGAGATCGGATACCGACTCAAGAACTTGATGCTCGTCGGAGACGGCATCGACAAGACCATCATCACCGGCACCAGAAGTGTCGCCCGCGGTTCCTCCACCGTCAGCTCCGCAACACTCGATGTATCGGGCGATGGATTTTGGGGAAGGGACATAACAATCGAGAACAGAGCAGGTCCACAGGATCACCAAGCGGTGGCGATGAAGGTGAGCTCAGATCTCTCCGTCTTCTACAGATGCAGCTTTAGAGGCTACCAAGACACACTCTACGCTCACTCCAATCGTCAATTCTACAGAGACTCCATAATTTCCGGCACCGTTGACTTCATATTTGGGGATGCCTCCGTTGTCTTCCAGAACTGCGACATCCTCCTCCGGAGGCCAATGTCCCACCAGTCCAATTTCATCACGGCACAGGGACGATCCGACCCGAACCAACCGACCGGGATTGTGATCCAAAACTGTAGGGTTAGGCCGGAGGGTTCCGCCGTAGGAAGAAATTACCTGGGAAGGCCATGGAAGAAGTATTCAAGAACGGTGTTCATGAAGAATGATCTGGATGGTTGTATTGATCCGAAAGGATGGAGTGAGTGGAGTGGTGGTTTTGCATTATCGACTCTGTATTATGCAGAGTATATGAACAATGGTGGAGGAGCTTCTACTCAGAATAGAGTGAATTGGCCTGGCTTTCATGTTCTGCGTTCTGCTTCTGAGGTTAGACCTTTCTCTGTGGATGAGTTTCTGCTCGGAGATCGGTGGATTCCAGCCACCGGCGTGCCCTTCTCCGCCGGTGTTTGA 1491 0.5171 MATASAVLLLLLLSASSISSVFGGGREMELLRLAHTQVVEARTWVKSLHHHQQSGVNVASSMLPTWSPPAMAVGVALGDCAKLYEESEQRMNELVSKAGDGVSWWVSSVMSNHRTCLDGLKEKGYDVEAEGGLHKNLTLSLQEVLHLLVKNNHRVKAKAKRAPLKGNISKSYGGLLTSWNPTKSGAHFTVAQDGSGNHRTIGAAMEAVSSMDHNRPKRVIIHVKSGIYNEKVEIGYRLKNLMLVGDGIDKTIITGTRSVARGSSTVSSATLDVSGDGFWGRDITIENRAGPQDHQAVAMKVSSDLSVFYRCSFRGYQDTLYAHSNRQFYRDSIISGTVDFIFGDASVVFQNCDILLRRPMSHQSNFITAQGRSDPNQPTGIVIQNCRVRPEGSAVGRNYLGRPWKKYSRTVFMKNDLDGCIDPKGWSEWSGGFALSTLYYAEYMNNGGGASTQNRVNWPGFHVLRSASEVRPFSVDEFLLGDRWIPATGVPFSAGV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1084 496 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 150 IPR035513 -
Alju11g1084 496 PANTHER PECTINESTERASE 69 486 - -
Alju11g1084 496 Gene3D - 182 496 IPR012334 -
Alju11g1084 496 Pfam Pectinesterase 188 482 IPR000070 GO:0030599|GO:0042545
Alju11g1084 496 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 124 IPR035513 -
Alju11g1084 496 Pfam Plant invertase/pectin methylesterase inhibitor 31 130 IPR006501 GO:0004857
Alju11g1084 496 SUPERFAMILY Pectin lyase-like 184 495 IPR011050 -
Alju11g1084 496 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
Alju11g1084 496 FunFam Pectinesterase 181 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1084 Alju-ChrAlju11 13472138 13477215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1084 7 496 Carbohydrate Esterase AT3G60730 50.667 1.93e-179 512