Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1058 ATGGAAGCAAGAGAAGGAATCAGTTCAGGGGTTACGGTAATTGGAGCAGAAGCTCCATCAGCCTATCACGTTGCACCGAGAACCGAAGCACCGAGCCAGACTCAAGTTCCTGATGTACCAGCAGCGGCACCAGCTGCACCAAATGTTGGTGCCTCACCAGGGAGTGTTGGATTGGATGGAACAGCAGTCAAGAAGAAACGAGGTAGACCAAGGAAGTATGGTCCCGACGGGTCTGTGGCTATGGCATTGTCACCTTTGCCAATTTCATCATCTGCGCCACTTTCTAATGACTTCTCATCTGGGAAGCGGGGCAAATCAGCTGGAATGGAGTACAAGAAACATAAGAAACTTGGATTGGAGCATTTGGGTGATTTGAATGCATGCTCCCTTGGTACAAACTTCATGCCTCATATCATCACAGTCAATACTGGCGAGGATATTACAATGAAGGTTATTTCTTTTTCTCAACAAGGACCCCGGGCTATATGCATCCTCTCTGCTACTGGTGTGATTTCAAATGTTACACTTCGTCAACCTGATTCTTCAGGGGGTACTTTGACCTATGAGGGTCGCTTTGAGATACTATCGTTGTCTGGATCATTCATGCCTACTGATAATCAAGGAACAAGAAGCAGGTCGGGCGGAATGAGTGTCTCTTTGGCAAGTCCTGATGGTCGTGTTGTAGGTGGTGGAGTTGCTGGTCTTCTTATTGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAATCAGCAAGACCCGAAACCAAAGAAGACCAAATCTGATTATGCCCCACCCGCTAGTGCTACCCCGCCAACTGTCCCTATTTCTTCTGCGCCGCCCTCAACTAACGCTGAAAAAGAAGGCATGGGCGGTGGACATGTCCTGCAAAATTCTGGAAACCTGAATTCCAGCATGACGTCTCCCTCACCATTCCGACGAGAAAACTGGGTGAACATGCACTCTATGCCAGATTTGAGACAGTCCGCTACCGACATTAACATCTCCCTTCCAGATAGTTGA 1032 0.4855 MEAREGISSGVTVIGAEAPSAYHVAPRTEAPSQTQVPDVPAAAPAAPNVGASPGSVGLDGTAVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLSNDFSSGKRGKSAGMEYKKHKKLGLEHLGDLNACSLGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDPKPKKTKSDYAPPASATPPTVPISSAPPSTNAEKEGMGGGHVLQNSGNLNSSMTSPSPFRRENWVNMHSMPDLRQSATDINISLPDS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1058 343 MobiDBLite consensus disorder prediction 299 318 - -
Alju11g1058 343 ProSiteProfiles PPC domain profile profile. 131 270 IPR005175 -
Alju11g1058 343 CDD DUF296 136 249 IPR005175 -
Alju11g1058 343 MobiDBLite consensus disorder prediction 22 78 - -
Alju11g1058 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 254 - -
Alju11g1058 343 Gene3D - 136 265 - -
Alju11g1058 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Alju11g1058 343 FunFam AT-hook motif nuclear-localized protein 1-like 136 266 - -
Alju11g1058 343 MobiDBLite consensus disorder prediction 250 343 - -
Alju11g1058 343 MobiDBLite consensus disorder prediction 325 343 - -
Alju11g1058 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 311 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1058 Alju-ChrAlju11 13094295 13099420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1058 6 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.516 1.57e-100 299