Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1057 ATGGATTATTGTGGGTCTAGTAAGAACAATGATAAGAATGGTGGTGATGAAGGTGGTCAGAGTCAGAGAGGGCCGTGTGGGGCGTGCAAGTTCCTGAGGCGAAAGTGCGTGAAGGGGTGTGTATTTTCACCCTACTTTGACTCCGATCAAGGCACGGCTCAGTTCGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAACGCCGCCAAGCTTCTGCTGCGAATCCCTCCTCACCACCGTCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCTAGGGTTCGTGATCCTGTCTATGGCTGCGTCGCCCACATCTTCGCCCTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAGCTTATGTGCAAGCTCGTCTATCGACGTTGCAGCGTCTGCCGGCGGTGGCGGTCGGAACTCTTCCTCAGCTTGAGATCTCTTCATCTTCTAACAATGACTTTCCCTTTGATCCAACTAATTCACTTCAGTTCTCAACTTTTCTCAACCCTTGTGATTTTCAACATGATGGGGATCTTCAAGCTTTAGCCAGAGATTTTGTATCAAGAGTGAAAGAGGAGAAGAAAATCTAG 588 0.5085 MDYCGSSKNNDKNGGDEGGQSQRGPCGACKFLRRKCVKGCVFSPYFDSDQGTAQFAAVHKVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRVRDPVYGCVAHIFALQQQVMNLQAELAYVQARLSTLQRLPAVAVGTLPQLEISSSSNNDFPFDPTNSLQFSTFLNPCDFQHDGDLQALARDFVSRVKEEKKI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1057 195 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 136 - -
Alju11g1057 195 Coils Coil 112 132 - -
Alju11g1057 195 MobiDBLite consensus disorder prediction 1 23 - -
Alju11g1057 195 Pfam Lateral organ boundaries (LOB) domain 25 123 IPR004883 -
Alju11g1057 195 ProSiteProfiles LOB domain profile. 24 126 IPR004883 -
Alju11g1057 195 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1057 Alju-ChrAlju11 13061575 13068438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1057 28 188 AS2 family AT2G45410 61.963 3.18e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju11g1057 LOB 4.8e-36 No_clan