Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1047 ATGGATCCAGTAGCTGCACAGGGTCGTCCCCTTCCACCACCTTTTCTCACCAGAGATCTTCATCTTCATCCCCATCACCAATTTCATCAGACCCACCACAATAACAATCACTCCGCTGCCGCCGACCTCGACGAGCAGGCCGGTAATGGAAGATTGAACCGCGGTCAGAAACGAGATCATGGGAACACCGCCACTGAGGGGAAGGAATTGGTTTCTAATAACACAGCTCCTACGGCCGGAGATTCTGCCTCCGGAGGTGGCGGTGGCGGTGGGGATAATAGTGCGAGAAGGCCTCGGGGCAGACCGGCCGGTTCGAAGAACAAGCCCAAGCCTCCGATCATCATAACGAGGGATAGCGCTAACGCGCTTAGGTCTCATGTCATGGAGATCGCTAACGGCGGAGATATCATGGACAGTGTCGCCACCTTCGCCCGGCGGAGGCAGCGTGGGGTTTGCATTCTGAGTGGGAGTGGCACCGTCACGAATGTCACCCTCCGGCAACCCGCTTCGCCCGGTGCAGTTGTGACCTTACACGGGAGATTCGAGATTCTATCACTCTCTGGCTCGTTCCTGCCGCCGCCGGCACCACCTGCCGCTTCGGGACTGGCCATATATCTGTCTGGCGGACAGGGTCAAGTCGTCGGAGGCACCGTGGTGGGGCCGTTGTTGGCGTCCGGGCCGGTGGTCATAATGGCTGCTTCGTTCGGAAATGCGGCGTACGAGAGGCTGCCGTTAGAGGAAGAAGAGACGCCGCCCGTGGCGGCGGTGACTGGAAGCGGAGGGTTAGGCTCGCCGGGAATCGTGGGACAACAGCAACAACAGAATCAAATCGTGGGAGATCCTAACACCACATCGATGTTTCATGGAGTTCCTCAGAATCTTCTGAATTCTTGCCAATTACCAGCTGAAGGATTCTGGGGTGGAGGCAACAACACTGTTCGTCCTCCATTCTAA 954 0.5744 MDPVAAQGRPLPPPFLTRDLHLHPHHQFHQTHHNNNHSAAADLDEQAGNGRLNRGQKRDHGNTATEGKELVSNNTAPTAGDSASGGGGGGGDNSARRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGGDIMDSVATFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLSGGQGQVVGGTVVGPLLASGPVVIMAASFGNAAYERLPLEEEETPPVAAVTGSGGLGSPGIVGQQQQQNQIVGDPNTTSMFHGVPQNLLNSCQLPAEGFWGGGNNTVRPPF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1047 317 ProSiteProfiles PPC domain profile profile. 120 256 IPR005175 -
Alju11g1047 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 296 IPR014476 GO:0003680
Alju11g1047 317 MobiDBLite consensus disorder prediction 51 65 - -
Alju11g1047 317 CDD DUF296 124 191 IPR005175 -
Alju11g1047 317 MobiDBLite consensus disorder prediction 66 81 - -
Alju11g1047 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 236 IPR005175 -
Alju11g1047 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 251 - -
Alju11g1047 317 FunFam AT-hook motif nuclear-localized protein 123 250 - -
Alju11g1047 317 Gene3D - 123 252 - -
Alju11g1047 317 MobiDBLite consensus disorder prediction 49 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1047 Alju-ChrAlju11 12879172 12880125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1047 1 317 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 60.843 1.44e-85 258