Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1031 ATGGATTCCAAGAAGCCTAACAAGATCACAGATATCGTTAGGCTTCAACAAATCCTGAAGAAATGGAAGAAGGTGGCAAATAATGCTTCCAAGAACAACTCCTGTTCTGTTGCCACTTCTTCGTCATCTTCTGCAAGCAATAACAGAAACAGTACTAGTGGTGGAGGAAGTAAAGGCATGAAGTTCTTGAAGAGAACTCTGTCTTTCACAGATATTTCCGGTTCGAATGAGACGGTGCCAAAAGGGTTTCTTGCTGTTTGTGTGGGAAAGGAGCTCAAGAGATTCATTATCCCAACAGAGTATTTGAGACACCAAGCTTTTGAGATGTTGCTGAGAGAAGCTGAAGAGGAGTTTGGTTTCCAACAGGAGGGAGTACTAAAGATTCCTTGCCAAGTATCAGTGTTTGAGAAAGTTTTGAAGGTTGTGCAAGGCAAAAAAGAAGCATTCTTGTCCCAAGACAAGGACAAGATCATTACTTGTTATATTTCAGACTGTGACGCTACTACATCATCTCATCAAGCTCAAATGTGTAGATGA 537 0.4115 MDSKKPNKITDIVRLQQILKKWKKVANNASKNNSCSVATSSSSSASNNRNSTSGGGSKGMKFLKRTLSFTDISGSNETVPKGFLAVCVGKELKRFIIPTEYLRHQAFEMLLREAEEEFGFQQEGVLKIPCQVSVFEKVLKVVQGKKEAFLSQDKDKIITCYISDCDATTSSHQAQMCR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1031 178 MobiDBLite consensus disorder prediction 32 59 - -
Alju11g1031 178 Coils Coil 12 32 - -
Alju11g1031 178 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 138 IPR003676 GO:0009733
Alju11g1031 178 MobiDBLite consensus disorder prediction 32 57 - -
Alju11g1031 178 Pfam Auxin responsive protein 21 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1031 Alju-ChrAlju11 12516577 12517113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1031 1 178 Calmodulin-binding Proteins AT2G24400 51.295 1.71e-58 179