Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0977 ATGAGACCTACCCAACCGCCGCAGGGCATGGGAACGAGCAATCAGGAGCGGCCGTGCCGCCGCAAGAGGAATTTGAGCTTGCCTTTGCCGCAGCGGGACACATCATTTGCCATGCCTCTTCCTCTGCCGCCATCCAACTCAATAACGTCGACGAGTCATCAATCGGCGTCCTCTCAGTCTCCCCAGCAGGTACCATTCGTCGAGCTCGAGCGACTCAATCGGATTGGTAGCGGCAGCGGGGGCACCGTCTACAAGGTCCGCCACCGACCTACCGCTCGTTTTTACGCGCTTAAGGTTATATACGGTACGCACGAGGAATCCGTCCGCCGTCAGATCCATCGAGAAATCCAGATCCTCCGCGATGTGAATGACCAGAACGTGGTCAAGTGCCATGATATGTACGATCATAGCGGCGAAATCCAGGTGCTTCTTGAGTTCATGGATGGTGGCTCCTTAGAAGGGAGACGCATCCCCAATGAACGACAGCTGGCGGATGTAGCACGCCAGATCCTCCGTGGCCTGGCCTACCTCCACCGCCTTCATATCGTTCATAGAGATATTAAGCCCTCAAATTTATTAATCAATTCGCAGAAGCAGGTTAAGATTGCCGACTTCGGGGTCGGTCGGATTCTGGCACAAACTATGGATCCGTGTAATTCGTCGGTGGGTACCATTGCTTATATGAGCCCTGAGAGAATCAATACAGACATCAATGATGGGCAATACGATGCGTATGCGGGAGATATATGGAGCCTTGGGGTCAGTATATTAGAATTCTACATGGGTAAATTCCCATTCGCGGTGGGAAGGCAAGGTGATTGGGCAAGCTTGATGTGTGCAATTTGTATGTCTCAGCCGCCGGAGGCACCCCCGACGGCGTCTATGGAGTTCCGGGATTTCATATCGCGCTGTTTACAGAGAGATCCGTCACGGAGGTGGACGGCTACGCGCTTGTTGGGGCACCCATTTATATTCCAGGGAATAGGAAACCAGAACCAGGTTCATCAGAATCTTCATCAATTGCTACCTCCGCCTGGACCTCCTTCTTCCTAG 1053 0.5309 MRPTQPPQGMGTSNQERPCRRKRNLSLPLPQRDTSFAMPLPLPPSNSITSTSHQSASSQSPQQVPFVELERLNRIGSGSGGTVYKVRHRPTARFYALKVIYGTHEESVRRQIHREIQILRDVNDQNVVKCHDMYDHSGEIQVLLEFMDGGSLEGRRIPNERQLADVARQILRGLAYLHRLHIVHRDIKPSNLLINSQKQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGKFPFAVGRQGDWASLMCAICMSQPPEAPPTASMEFRDFISRCLQRDPSRRWTATRLLGHPFIFQGIGNQNQVHQNLHQLLPPPGPPSS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0977 350 MobiDBLite consensus disorder prediction 1 15 - -
Alju11g0977 350 CDD PKc_MAPKK_plant_like 68 326 - -
Alju11g0977 350 SUPERFAMILY Protein kinase-like (PK-like) 70 343 IPR011009 -
Alju11g0977 350 Gene3D Phosphorylase Kinase; domain 1 45 148 - -
Alju11g0977 350 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Alju11g0977 350 MobiDBLite consensus disorder prediction 40 62 - -
Alju11g0977 350 Pfam Protein kinase domain 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0977 350 Gene3D Transferase(Phosphotransferase) domain 1 150 340 - -
Alju11g0977 350 MobiDBLite consensus disorder prediction 1 62 - -
Alju11g0977 350 FunFam Mitogen-activated protein kinase 2 149 336 - -
Alju11g0977 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Alju11g0977 350 SMART serkin_6 69 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0977 350 ProSiteProfiles Protein kinase domain profile. 69 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0977 350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 34 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0977 Alju-ChrAlju11 11809729 11810781 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0977 1 340 MAP Kinase Kinase Gene Family AT1G51660 68.661 1.22e-167 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Alju11g0977 Pkinase 6.2e-64 CL0016