Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0973 ATGAAGGAGACGACGGAGAAAAAGAAGTACTCTATTGGCCCTGAGAATTATGAACTGCTCGAGGAAATCGGCCAGGGGGTCAGTGCTCATGTGCATCGTGCTCGTTGCATTACTCTTGACGAGATCGTCGCCATTAAAATCCTCGATTTTGAGCGAGAAAATTGCGATCTGAATAATGTTTTTCGTGAAGCACAGACTATGACCTTGGTTGACCACCCTAATGTCGTCAAATCACACTGCTCCTTTGTTAGTGATCATAATCTATGGGTTGTCATGCCATATATGGCCGGTGGTTCGTGTCTTAACATATTGAAAGCCGCCCACCCAGATGGTTTTGAGGAGGTTGTAATAGCAACAATATTGCGAGAGGTGTTGAAGGGTTTAGAGTACCTTCATCATCAGGGCCATATACATAGAGATGTTAAAGCTGGGAACATTCTAATTGATTCACGTGGTGCAGTCAAGCTGGGGGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTGCTAGAAATACGTTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGACTTCAAAGCAGACATATGGTCTTTTGGTATAACAGCATTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAGTATCCTCCCTTGAAGGTACTTATTATGACATTGCAAAATGCACCGCCTGGCCTTGATTATGAACGTGACAAGAAGTTCTCTAAGTCATTTAGGAAGATGATTGCTGACTGCTTGGAAAAAAATCCTTCAAAACGACCCAGTGCAAGCAAGTTGCTAAAGGGTACCTTCTTTAAGCAAGCTCGCTCAAATGATTATATTTTGCGAAAGCTTTTGGAGGGGCTGCCTAATTTAGGTGATCGCATCAAGGCCCTAAAGAGGAAAGAAGAAGATATGCTTGCCAAAGAACAAATGCCTGATGGGCAGAAGGAGGAATTATCACAGAATGAATACAAGCGAGGAATTAGTAGCTGGAACTTCAATATTGAAGAAATGAAAGCTCAGGCTTCATTGGATTTTGATGATGCAATATCTGAAATCAACCCGGGAGGGAGTTCTAATAGTCTATCTGCAACTGATGTACAATCACCACGTGCAAACAACTCTCAAATTGCTGATATGGAAGATAACGAAGAGATCCAACATCAATCAGCTACTGTGCCTGCAGTAGACTCCATAACAACTGATGCCAAGGTCAGAAGTGGAAATTCTAATGATGACTCTATCACCAGTTTAAGCCATGAACATCACTCATCACAGAGTGCTTCACTGTGTCATGAAGATCATGTGTTGGACCATAATTTGAGTGAAAAATGTGAAATGGAGAATGGTGGAAGACAGGTGGAGCCTACCCATTCTTATCACAGAAGATGCTTATCAAGCATCGTACCTGAAGTTACTCACACACCTACTCATGGAGAAATAGAGAAGATACAAAATCTGCCCGTTAGCGTTTCAACTTCCAATGCAACAACAGTACCGCAGTCAGGAGAAGCAGCCACTTTGGATGACAATGATGAGAAACTAAAGGCACCAGTTGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATCTTGAGTTAGAAAAGGTGGGCCCAACTCCCATTCTGCAAAAGAGTCAAAGCATGCAGGTTATTAGCTCACACAATGTAACTCCTCTACCTTCAATTTTACCGCCATCATCGACACCTGAGGCTACATCATCAAATCTTTCTGGTTCTTCTCTTCACCAATTATTGCGTTATGTGTTGCAAGCAAATATTGAACAAAGGGACACTATCTTACTTTTAATGAAACAAGTTACTGCTGGTGACTCTACAGTTGATGGAGCATCTAAGCAAGCAGCTTTGGCAATGGAGAAATCCTTGCTGGAAGCATCTCATGAGAAAGAGAAAGAGCTACTTCGTGAAATAGCTGAGTTGCATAGGAGGCTCCAAAGTGCCCAGGATGAGATTAAAAATTTGAAATCAGAAAACGAACAGGTGTGA 2031 0.4269 MKETTEKKKYSIGPENYELLEEIGQGVSAHVHRARCITLDEIVAIKILDFERENCDLNNVFREAQTMTLVDHPNVVKSHCSFVSDHNLWVVMPYMAGGSCLNILKAAHPDGFEEVVIATILREVLKGLEYLHHQGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRARNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPLKVLIMTLQNAPPGLDYERDKKFSKSFRKMIADCLEKNPSKRPSASKLLKGTFFKQARSNDYILRKLLEGLPNLGDRIKALKRKEEDMLAKEQMPDGQKEELSQNEYKRGISSWNFNIEEMKAQASLDFDDAISEINPGGSSNSLSATDVQSPRANNSQIADMEDNEEIQHQSATVPAVDSITTDAKVRSGNSNDDSITSLSHEHHSSQSASLCHEDHVLDHNLSEKCEMENGGRQVEPTHSYHRRCLSSIVPEVTHTPTHGEIEKIQNLPVSVSTSNATTVPQSGEAATLDDNDEKLKAPVVQQRGRFKVTSENLELEKVGPTPILQKSQSMQVISSHNVTPLPSILPPSSTPEATSSNLSGSSLHQLLRYVLQANIEQRDTILLLMKQVTAGDSTVDGASKQAALAMEKSLLEASHEKEKELLREIAELHRRLQSAQDEIKNLKSENEQV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0973 676 MobiDBLite consensus disorder prediction 357 436 - -
Alju11g0973 676 CDD STKc_OSR1_SPAK 15 278 - -
Alju11g0973 676 SUPERFAMILY Protein kinase-like (PK-like) 15 279 IPR011009 -
Alju11g0973 676 Gene3D Transferase(Phosphotransferase) domain 1 98 332 - -
Alju11g0973 676 ProSiteProfiles Protein kinase domain profile. 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0973 676 MobiDBLite consensus disorder prediction 360 387 - -
Alju11g0973 676 MobiDBLite consensus disorder prediction 394 432 - -
Alju11g0973 676 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 670 IPR047173 GO:0043539
Alju11g0973 676 Coils Coil 638 676 - -
Alju11g0973 676 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Alju11g0973 676 SMART serkin_6 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0973 676 Gene3D Phosphorylase Kinase; domain 1 5 93 - -
Alju11g0973 676 FunFam Serine/threonine-protein kinase BLUS1 6 94 - -
Alju11g0973 676 FunFam serine/threonine-protein kinase BLUS1 isoform X1 98 331 - -
Alju11g0973 676 Pfam Protein kinase domain 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0973 Alju-ChrAlju11 11744784 11756180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0973 6 658 MAP Kinase Kinase Kinase Kinase AT1G79640 58.651 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Alju11g0973 Pkinase 1.6e-60 CL0016