Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0968 ATGTCACAGAGGAAGGTGAAGAACGATGAAAATAGCAACACGCCTACAAACAAGAACACGAAACGCACTCGCAAAAGCATTCCCAGAGACTCTCCTCCGCAACGAAGCTCCGTTTATCGAGGCGTCACTAGGCATCGTTGGACGGGTCGGTATGAGGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAAAAAGGAAGACAAGGGGCATATGATGATGAAGAAACTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCATCCTCAATTTTCCTCTCACAAATTATGAACAAGAGCTCAAGGAGATGGAGGGTCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGAGTCTCAAAGTACAGAGGCGTAGCAAGACACCATCACAATGGAAGATGGGAAGCTCGGATTGGCAGAGTCTTCGGCAACAAATATCTTTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCATACGATATGGCAGCCATAGAACACAGAGGACTTAACGCCGTTACAAACTTTGACCTCAGCCGTTACGTCAATTGGCTCCGTCCTAAAACCCAAGACTCCCATGAAAACCCTACCACTGATAACAGCACCGAGTCTGGATCAAGCTCTAATAAGCCTGAACTTGAGTTTGGTTTCGGGTCCCATCAGCTCAGTTCAAACTCCGACGACACACTGGCGGAGCCGCCACTATCTGTCGGCGGGGCTCAGCCGTCGTCATCGGCACTAGGGCTTCTCTTGCAATCGTCAAAGTTTAAGGAAATGTTGGAGAGGTCTTCATCAGGTGAAGATCACCATAATAATTACCCTGCAACAACGGAAACTTCAGAATCAAAGCCTCCTCGTCGTACATTTCCTGAAGATATTCAAACATTCTTTGATTGTCATGATTCAAGCAGCTACACTGAAACTGATGACATCATATTTGGGGATTTGAGCGCAATTGCTGCTCCAATTTTCCATTGCGAGCTGGATGCTTAG 1047 0.4661 MSQRKVKNDENSNTPTNKNTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEETAARAYDLAALKYWGQDTILNFPLTNYEQELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEHRGLNAVTNFDLSRYVNWLRPKTQDSHENPTTDNSTESGSSSNKPELEFGFGSHQLSSNSDDTLAEPPLSVGGAQPSSSALGLLLQSSKFKEMLERSSSGEDHHNNYPATTETSESKPPRRTFPEDIQTFFDCHDSSSYTETDDIIFGDLSAIAAPIFHCELDA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0968 348 ProSiteProfiles AP2/ERF domain profile. 137 195 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 SUPERFAMILY DNA-binding domain 37 102 IPR016177 GO:0003677
Alju11g0968 348 FunFam AP2-like ethylene-responsive transcription factor 136 197 - -
Alju11g0968 348 Gene3D AP2/ERF domain 136 197 IPR036955 GO:0003700|GO:0006355
Alju11g0968 348 Gene3D AP2/ERF domain 38 103 IPR036955 GO:0003700|GO:0006355
Alju11g0968 348 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 PRINTS Ethylene responsive element binding protein signature 177 197 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 MobiDBLite consensus disorder prediction 1 41 - -
Alju11g0968 348 SMART rav1_2 38 107 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 SMART rav1_2 137 201 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 MobiDBLite consensus disorder prediction 1 21 - -
Alju11g0968 348 ProSiteProfiles AP2/ERF domain profile. 38 101 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 267 - -
Alju11g0968 348 MobiDBLite consensus disorder prediction 276 307 - -
Alju11g0968 348 MobiDBLite consensus disorder prediction 205 261 - -
Alju11g0968 348 MobiDBLite consensus disorder prediction 205 249 - -
Alju11g0968 348 CDD AP2 136 197 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 FunFam AP2-like ethylene-responsive transcription factor 37 103 - -
Alju11g0968 348 SUPERFAMILY DNA-binding domain 136 197 IPR016177 GO:0003677
Alju11g0968 348 Pfam AP2 domain 136 186 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 Pfam AP2 domain 37 93 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 CDD AP2 37 101 IPR001471 GO:0003700|GO:0006355
Alju11g0968 348 MobiDBLite consensus disorder prediction 287 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0968 Alju-ChrAlju11 11659468 11662551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0968 34 233 AP2-EREBP Transcription Factor Family AT5G57390 61.574 8.47e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju11g0968 AP2 1.1e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0968 11 11659468 11662551 Alju11g0968 11 11659468 11662551 ECH