Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0963 ATGCCGGTGGCGGTGCCAACGTCTGTTGATAGGAGCGCTGGAGTTGGAGCTGCTGTTGATAGGTGCCAACGTCGAGGTCGGTGCGCTGAGACAAGAGGTTGTCTACTCAACGTCGAGGGATCGCTGATAAGCTATGCACTCATGGAGGAGCCGAGTTATGGCTCCGATGTGGATATGAAAAAGTTTGCAGAGGAGAGAGGGCAGGAACTCAAACCTCACCCTGCAATTTCAAAAAGACTTGGACATCATTCTCATTCTCATTCATGTTTTTATATGACTGCATACATGATATCATTATCAATGAGCTTTTTCAACCTACACAACATGGTTTTCATAGGGCCATTGTTCATCCTCCTACTTCAATACCAAACTTCAACATCTAGTCTCACACATCCAAGGCATCACCATTTTTCTCACTCTCTTCTCACAGATAAGGCTGCTCTTCTGCAATTCAAGAAAACAATCATACTTGATCCACATTCCACACTTTCTAACTGGGATGAATCTGTTCATGTGTGCAATTTCACGGGCGTTAAGTGTGATAAATCTCAGCACCGAGTCACCGAGCTAATCCTCACTGAAACTCGTCTTGTGGGGTTGCTTTCACCCTTCCTTTCCAATCTCACTGGACTGCACATCCTTGACATTGTTGACAATCACTTATTTGGCATTATCCCACCAGAACTTTCCTCCCTTAGACGCCTCCATCGACTCCATCTCGAGGGGAACAACTTGCATGGTTCCATACCAGATTCCTTTTCTCAGCTTTCTAAACTTAATGTGCTGCTAATCAGAGATAGTAACATAAAAGGTTCACTTTCTCCATCTCTTTTCTCCAATTGCACACTGGAAATTGTGGACCTTTCTATCAACTTCCTCAGTGGTAAGATCCCAGAGGAGATTGGAAACTGTCCGGGTCTGAGGAGTCTCAGTCTTTACAACAATCAATTTACTGGACAGATTCCTCTCTCTCTAAGTAATCTGTCACTTGTAAATTTAGATGTAGAGTACAATCTATTGTCTGGAGAATTGCCCTCAGACGTTGTAAGCAGATGTCCTGGTGGTCTTCTTTACCTGCATTTGTCATACAATTATATGGTAAGTCATGATCATAATGCAAATCTTGATCCATTTTTTGCTGCTCTTAGAAACTGCAGCCGACTAGAGGAGCTTGAATTGGCCGGCATGGGCCTTGGGGGAATGTTCTCCGATACCATATGTCAAGTTGGCACCAAACTAAAAAGCCTGCAGCTGCAGGAAAATCAAATATATGGATCAATCCCTGACAGTGTATCAAATCTTTCCAGCCTTATGATCCTGAATTTAACATCCAATCTTCTCAGTGGAACCATTTCGCCGGAGATCAGCATGTTGCCAAACCTGGAACAACTTTTCTTATCAAACAACCACTTCAAATCAGAAATTCCAGAAGCACTGGGCAATTGTCTAAATCTGGGTCTCTTAGATCTCTCACACAATGAATTTACTGGAGGGATTCCGGAAAGTCTGGGAAAGTTGGGTCGACTAAATTATTTGTTTCTCAATAATAACCACCTGACAGGAAATGTACCTTCTACATTAGGACAGTGCATTGATCTGTACAGGCTTGACTTGTCCTATAATAGATTAACAGGAAGAATCCCACCAGAAATCTCAGGCTTTCATGAAATTAGAATTTTCATAAATCTCTCACATAACCAACTAGAAGGTCCTCTGCCAGTTGAGCTCAGCAAACTAGAAAAGGTTCAAGAGATGGATTTTTCATCAAATTACCTAACTGGAAGTATCTTCCCTCAGATGGCAAGCTGCATTGCTGTATCGATGATAAATTTTTCAAACAATTTTCTCGAAGGTGAGCTTCCTGAAACCTTGGGTGAACTAAAGAACCTTGAAACTTTTGATGTTTCAGGAAACAATTTGTATGGATTGATCCCCAAAACTCTTAGTAAAATAGATACACTTTCTTTCCTCAATCTATCATACAACAACCTAGAAGGAATGGTTCCATCTGGTGGCATCTTTGATTCAGCATCAAATCTATCATTCTTAGGAAACCCACATCTTTGTGGAACAATCACAAGCAAAGTTTCATGCTTTCAAAGGAGACATTGGCTCAGAAATCGCCTGTTCTCGATTATTTTCATCTTGATCATCTGCATAATCTTGTCAATGATTTGCTGCATAATTGGATTTAAGCGTGTTAAAGTGATTATTTCTGCCCATGGAACTGAGTTAGGTGGAAAACCAGCCAGACGTGAACTGATAAGTAACTTCCCAAGAATCACATACAAGGAACTATCAGAGGCTACTGAAGGATTTGATGATCAGAGACAAGTAGGATCAGGTAGCTATGGACGTGTCTATAGAGGAGTTCTTCCAGATGGAACCCCAGTAGCAGTAAAGGTGCTGCATTTGAAGTCTGGAAATTCCACCAAGAGCTTCAATAGAGAATGTCAAGTTTTAAAGAGCATTCGACATAGGAACCTGATAAGGATTACCACTGCATGTAGTCTGCCTGATTTTAAAGCTCTTGTTCTGCCTTATATGGCCAATGGGAGTTTGGAGAGCCGTCTCTATGCTTCTTCGGGATCTTCTGACCTGAGTATCATCCAGAGGGTGAATATTTGCAGTGACATAGCTGAAGGGTTGGCCTATCTGCATCATCATTCTCCAGTCAGAGTCATTCATTGTGATCTAAAACCAAGCAATGTTCTTCTTAATGATGACATGACAGCAGTAGTTTCAGATTTTGGGATTGCAAGGTTAATTATGAATGTTGGAGGAGGAGGAAATACTGGGTTTAATGATAACATGGGGAGCTCCACTGCAAAATTGTTATGTGGATCTCCTGGATACATTGCGCCAGAGTATGGATTCAGATCAAATACATCTACAAAAGGAGATGTGTACAGCTTTGGTATTCTTGTTCTTGAGATGGTGACTAGAAAGAGGCCAACGGATGACATGTTTTCTGGTGGTTTAAGCCTTCACAAATGGGTAAAACTTCATTATCATGGAAGGTTAGAAAAAGTGACAGACTCATGTTTGGTTACAGCTTCAAGAGATCAGTCACAGGAGGTGAAAAGAATGTGGGAAGTTGCAATTGGAGAGTTAATTGAGCTGGGGATCCTTTGCACACAGGAATCACCTTGTACAAGGCCTAGTATGCTTGATGTAGCAGATGACTTGGATCGTCTTAAGAGATACCTTACTGGGGACACAACTAGAACCTTTGCCTCGTCTCTTGGAATTTCATCTTCTACTACAGATTATTTTTAA 3279 0.4145 MPVAVPTSVDRSAGVGAAVDRCQRRGRCAETRGCLLNVEGSLISYALMEEPSYGSDVDMKKFAEERGQELKPHPAISKRLGHHSHSHSCFYMTAYMISLSMSFFNLHNMVFIGPLFILLLQYQTSTSSLTHPRHHHFSHSLLTDKAALLQFKKTIILDPHSTLSNWDESVHVCNFTGVKCDKSQHRVTELILTETRLVGLLSPFLSNLTGLHILDIVDNHLFGIIPPELSSLRRLHRLHLEGNNLHGSIPDSFSQLSKLNVLLIRDSNIKGSLSPSLFSNCTLEIVDLSINFLSGKIPEEIGNCPGLRSLSLYNNQFTGQIPLSLSNLSLVNLDVEYNLLSGELPSDVVSRCPGGLLYLHLSYNYMVSHDHNANLDPFFAALRNCSRLEELELAGMGLGGMFSDTICQVGTKLKSLQLQENQIYGSIPDSVSNLSSLMILNLTSNLLSGTISPEISMLPNLEQLFLSNNHFKSEIPEALGNCLNLGLLDLSHNEFTGGIPESLGKLGRLNYLFLNNNHLTGNVPSTLGQCIDLYRLDLSYNRLTGRIPPEISGFHEIRIFINLSHNQLEGPLPVELSKLEKVQEMDFSSNYLTGSIFPQMASCIAVSMINFSNNFLEGELPETLGELKNLETFDVSGNNLYGLIPKTLSKIDTLSFLNLSYNNLEGMVPSGGIFDSASNLSFLGNPHLCGTITSKVSCFQRRHWLRNRLFSIIFILIICIILSMICCIIGFKRVKVIISAHGTELGGKPARRELISNFPRITYKELSEATEGFDDQRQVGSGSYGRVYRGVLPDGTPVAVKVLHLKSGNSTKSFNRECQVLKSIRHRNLIRITTACSLPDFKALVLPYMANGSLESRLYASSGSSDLSIIQRVNICSDIAEGLAYLHHHSPVRVIHCDLKPSNVLLNDDMTAVVSDFGIARLIMNVGGGGNTGFNDNMGSSTAKLLCGSPGYIAPEYGFRSNTSTKGDVYSFGILVLEMVTRKRPTDDMFSGGLSLHKWVKLHYHGRLEKVTDSCLVTASRDQSQEVKRMWEVAIGELIELGILCTQESPCTRPSMLDVADDLDRLKRYLTGDTTRTFASSLGISSSTTDYF 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0963 1092 CDD STKc_IRAK 779 1066 - -
Alju11g0963 1092 Gene3D Ribonuclease Inhibitor 141 282 IPR032675 -
Alju11g0963 1092 FunFam LRR receptor-like serine/threonine-protein kinase EFR 411 703 - -
Alju11g0963 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Alju11g0963 1092 Pfam Leucine rich repeat 412 471 IPR001611 GO:0005515
Alju11g0963 1092 SUPERFAMILY L domain-like 437 690 - -
Alju11g0963 1092 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 849 1076 - -
Alju11g0963 1092 Gene3D Transferase(Phosphotransferase) domain 1 849 1079 - -
Alju11g0963 1092 Pfam Protein kinase domain 774 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0963 1092 Pfam Leucine rich repeat N-terminal domain 143 181 IPR013210 -
Alju11g0963 1092 SMART LRR_typ_2 458 482 IPR003591 -
Alju11g0963 1092 SMART LRR_typ_2 627 650 IPR003591 -
Alju11g0963 1092 SMART LRR_typ_2 506 530 IPR003591 -
Alju11g0963 1092 SMART LRR_typ_2 232 255 IPR003591 -
Alju11g0963 1092 FunFam Leucine-rich repeat receptor-like protein kinase 142 299 - -
Alju11g0963 1092 ProSitePatterns Protein kinases ATP-binding region signature. 779 801 IPR017441 GO:0005524
Alju11g0963 1092 Gene3D Ribonuclease Inhibitor 283 353 IPR032675 -
Alju11g0963 1092 SMART serkin_6 773 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0963 1092 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 282 1065 - -
Alju11g0963 1092 Gene3D Ribonuclease Inhibitor 355 699 IPR032675 -
Alju11g0963 1092 SUPERFAMILY L domain-like 142 367 - -
Alju11g0963 1092 Gene3D Phosphorylase Kinase; domain 1 754 848 - -
Alju11g0963 1092 ProSiteProfiles Protein kinase domain profile. 773 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0963 1092 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 753 848 - -
Alju11g0963 1092 SUPERFAMILY Protein kinase-like (PK-like) 753 1063 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0963 Alju-ChrAlju11 11601088 11606653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0963 135 1075 Receptor kinase-like Gene Family AT3G47570 34.187 1.13e-153 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju11g0963 Pkinase 2.3e-41 CL0016