Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0958 ATGAATGTCCCCCACATCTTTACGAATGGTTGTAGTGGAAAGCTACAGGGTCTTTGCAAAGTAAGAGGGATTTGCAGGATTCACAGATCGCTCCCATTCCCGTTCCGGAATACTTACTTGGAGATGGGGGTATACCTCAGCAGTCCCAAAACAGAAAAGTCCTCTGAAGATGGCGAGAATGACAGGCTTCGCTATGGTTTATCTTCCATGCAAGGGTGGCGTAGAACCATGGAAGATGCTCATGCTGCCCATCCTGATTTAGATGGGTCTACGTCTTTCTTTGCTGTTTATGATGGCCATGGAGGTAATGAAGTTGCTAAATTCTGTGCCAAGCATCTACACCAACAGCTGCTCAAGCATGAAGCTTATTTAGCTGGAGATTTAGGCACATCTTTACAAAACTCTTTTCTCAGAATGGATGACATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTAGGAGAAAAATCAAAAAAGTTTTCTGGTTTGAGAAATTGGTTTATAAGGACTTCAAAGAAGGGTGCGGTCAATGGTGAAGTTGATGACTGGGCTTATGAGGAGGGGCCCCATTGTGGCTTCAGGGGACCAAAGGCAGGATGCACTGCTTGTGTTGCAGTAATCCGAGGCAACCATCTTCTTGTTGCAAATGCTGGTGATTCCCGCTGTGTATTATCAAGGAAAGGCCAGGCACATGATTTAACTAAAGATCACAAGCCTGACCTCGAGGTTGAAAAATACAGGATTCAAGAAGCTGGTGGTTTTATTCAATTTGGACGTGTCAATGGCAGCTTAAACTTGACTAGAGCAATTGGAGATATTGAATTCAAGGAAAATGAGCATTTGCCTGCGGAGAAGCAGATGGTAACTGCTGATCCAGAGTTAACTTCTGTTGAACTTTGCTATGATGATGAGTTTCTCGTAATAGCTTGTGATGGAATATGGGACTGCATGTCAAGCCAACATCTTGTGGACTTCATACATGAACAGTTAAAGACGGAAAACGATCTAAAAGTGGTCTGTGAGAGAGTATTGGATTGGTGCTTGGCACCGGCAGCTGGTGGTCTGGGATGTGACAACATGACCATGATCTTGATTCAGTTCAAAGGGCCTTCAAATCCAGGTGGTTCTGTCATTAACCAGCAAGCCTCTGTCGTCCGCAGATAA 1170 0.4453 MNVPHIFTNGCSGKLQGLCKVRGICRIHRSLPFPFRNTYLEMGVYLSSPKTEKSSEDGENDRLRYGLSSMQGWRRTMEDAHAAHPDLDGSTSFFAVYDGHGGNEVAKFCAKHLHQQLLKHEAYLAGDLGTSLQNSFLRMDDMMRGQRGWRELAVLGEKSKKFSGLRNWFIRTSKKGAVNGEVDDWAYEEGPHCGFRGPKAGCTACVAVIRGNHLLVANAGDSRCVLSRKGQAHDLTKDHKPDLEVEKYRIQEAGGFIQFGRVNGSLNLTRAIGDIEFKENEHLPAEKQMVTADPELTSVELCYDDEFLVIACDGIWDCMSSQHLVDFIHEQLKTENDLKVVCERVLDWCLAPAAGGLGCDNMTMILIQFKGPSNPGGSVINQQASVVRR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0958 389 Pfam Protein phosphatase 2C 64 144 IPR001932 -
Alju11g0958 389 Pfam Protein phosphatase 2C 197 354 IPR001932 -
Alju11g0958 389 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Alju11g0958 389 CDD PP2Cc 64 369 IPR001932 -
Alju11g0958 389 SMART PP2C_4 54 367 IPR001932 -
Alju11g0958 389 PANTHER PROTEIN PHOSPHATASE 2C 52 368 IPR015655 GO:0004722|GO:0006470
Alju11g0958 389 SUPERFAMILY PP2C-like 44 372 IPR036457 -
Alju11g0958 389 ProSiteProfiles PPM-type phosphatase domain profile. 64 369 IPR001932 -
Alju11g0958 389 Gene3D - 41 370 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0958 Alju-ChrAlju11 11511756 11519118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0958 42 375 PP2C-type Phosphatase Gene Family AT2G25070 70.149 6.15e-178 497