Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0949 ATGCCTTCCAGATCCTTCCCTTCTAGTCCCAACCCTCCAAGTCCAAGTATTTTCATTAAAACCAGAGTCATCTTCCTCGCACTCACAATCTCAGCTTCTGTTGTAATTGTATGTTCAATCATTTACTTTCTTTACCACTTCTGGTATTCTATAATAGACAGAGCTAAAACTATCCCCTTTGATTCGAGTGCTCCTTTGAAGCTTGAAAGATTCTCATACAAAGAATTGAAGCAAGCCACAAATGGCTTTGATGTCGCCAATGTAATTGGTAAAGGAGGGTCAGGAACTGTGTTCAGAGGAACACTTAAAGATGGGAAATTGATTGCAGTTAAGAGGCTAGACGCTTTGTCTCTGCAAACAGAGAGAGAGTTTCAGAATGAGCTTCAGATTCTAGGTGGGTTAAGATCTCCTTTTATTGTGACCCTTTTGGGGTATTGTGTGGAAAAGAACAAGAGAGTTTTGGTTTATGATTACATGCCCAATAGAAGCTTACAGGAGTCCCTATTTGGAGGAGATGATGATGGGTGTTTGTGTTTGAGCTGGGAGAGAAGGTTCCACATCATTCTAGATGTTTCTAGAGCCCTTGAATTCTTACACCTTGGTTGTGATCCTCCAGTGATTCACGGTGATGTTAAGCCAAGCAATGTTCTTCTTGATTCAGAGTTCAGAGGGAAGATTTCAGACTTTGGATTGTCAAGGATCAAAGTGGAGAATGAGTTTGGTGTAGATATGTTTAGCCAGGACTTGGGGAGGAGTCAAGAACTATGGAAAAGTCAAGAGCTTTCAGGTAATTTAACTGCTGAAACTCCAACTCCAGCTATTGGTACACCAGTTGAGAGTGTTAATAATGAAGTAGACTTTGCTTTAGCCTTGCAAGCATCTTCATCATCTAAAAATAGCAAGACATGTTTTAATGTTAAAGCTTTGAGCTTGAATTCTTTCAATTATAATGCCAATATTGCCAATGAGAGTGAAATCAGGGGTTGGAGTAATAATAATGCAAAGGGAAAGGAAATATCAACTCTAGATCATATTGGTGGGGATGACTGGAATCAGAAATTTGTTCCTTATGATGACGAGTTTTCTAGCATTGATCATAGTAAGGAATTAACTACTGTGAATGCTTCTTCTGTGGATGGAGAGAAAAAGAAAATTAACGGGAAACAGTGGGGAAAGGATTGGTGGTGGAGACAAGATGGGACTGATGAATTATGTAGTAGAGACTATGTGATGGAGTGGATTGGGAGTCAAATTTGTCCGTCAAACCCAGATTGGATTGAAGAAAAGAAGAACATTAATGAAAAACCGGAGTTGGAAACTTCAAGTCCAGTGGATCATAAAGCGGATGATGAAGCAAATGGGCCTCAACTACAAGCATTTGGAGTAGTGGGAGATACAGAGAATGTGGTTGAGAGGAAAGAAGCGAGGGGAAAGAAGAAGAATCGGAAGAAAAAACCGAGGAAGATGCAAGAATGGTGGAAAGAAGAGCACCTTGCCGAATTAAGCAAGAAGAGTGGTAAGCTGAAGAATCTTCAAACCAAGTGGAAGAAAGGCTTCAAGGTGCCACATTTTGACTTGGGGAGAAGGTTTTATCTTTGCAGGCGAATGAGAAGGAACTTCGCCGAAGAAGAAGCTCAGGACGAGAGCGATCATCAAAATGGTGAGTTCAGTTTCAGGAGAGGTTGGAGGAAGAAAAGTACTCATTCGATCGGTAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTGAGCAGCACAACAAGCATGAGAGGAACACTATGTTATGTTGCACCAGAATATGGAGGGTGTGGGTACTTAATGGAGAAAGCTGATATTTACAGTTTAGGAGTTTTGATCCTTGTGATTGTGTCAGGAAGAAGACCATTACATGTTCTTGCATCACCAATGAAGCTAGAGAAAGCAAACTTAATAAGCTGGTCCAGGCACTTGGCTCATTCTGGTAACATTTTAGAGCTAGTAGATGAGAGACTTGTGAAAGATTACTACAACAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCTTGCTTACAGAAGATTCCGGAACTGAGGCCGGATATAGGGGACGTTGTCAAGATTTTGAAGGGCGAGATGGACCTTCCACCACTGCCATTCGAGTTTTCGCCATCTCCTCCTTCCAAGTTTTACAGCAAATCAAGGACTAAACAGCAGAAAAGCACTACAGAATAA 2217 0.4141 MPSRSFPSSPNPPSPSIFIKTRVIFLALTISASVVIVCSIIYFLYHFWYSIIDRAKTIPFDSSAPLKLERFSYKELKQATNGFDVANVIGKGGSGTVFRGTLKDGKLIAVKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGGDDDGCLCLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSEFRGKISDFGLSRIKVENEFGVDMFSQDLGRSQELWKSQELSGNLTAETPTPAIGTPVESVNNEVDFALALQASSSSKNSKTCFNVKALSLNSFNYNANIANESEIRGWSNNNAKGKEISTLDHIGGDDWNQKFVPYDDEFSSIDHSKELTTVNASSVDGEKKKINGKQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNPDWIEEKKNINEKPELETSSPVDHKADDEANGPQLQAFGVVGDTENVVERKEARGKKKNRKKKPRKMQEWWKEEHLAELSKKSGKLKNLQTKWKKGFKVPHFDLGRRFYLCRRMRRNFAEEEAQDESDHQNGEFSFRRGWRKKSTHSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWSRHLAHSGNILELVDERLVKDYYNKEQASLCINLALACLQKIPELRPDIGDVVKILKGEMDLPPLPFEFSPSPPSKFYSKSRTKQQKSTTE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0949 738 FunFam putative receptor-like protein kinase At1g80870 159 272 - -
Alju11g0949 738 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Alju11g0949 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Alju11g0949 738 PANTHER OS07G0586332 PROTEIN 1 732 IPR044576 -
Alju11g0949 738 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Alju11g0949 738 Pfam Protein kinase domain 85 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0949 738 ProSiteProfiles Protein kinase domain profile. 83 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0949 738 MobiDBLite consensus disorder prediction 721 738 - -
Alju11g0949 738 Gene3D Transferase(Phosphotransferase) domain 1 556 709 - -
Alju11g0949 738 Gene3D Transferase(Phosphotransferase) domain 1 159 271 - -
Alju11g0949 738 MobiDBLite consensus disorder prediction 436 452 - -
Alju11g0949 738 MobiDBLite consensus disorder prediction 713 738 - -
Alju11g0949 738 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
Alju11g0949 738 FunFam Receptor-like serine/threonine-protein kinase At4g25390 559 709 - -
Alju11g0949 738 SUPERFAMILY Protein kinase-like (PK-like) 63 724 IPR011009 -
Alju11g0949 738 MobiDBLite consensus disorder prediction 436 490 - -
Alju11g0949 738 Coils Coil 494 514 - -
Alju11g0949 738 SMART serkin_6 83 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0949 Alju-ChrAlju11 11445690 11447906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0949 570 703 Receptor kinase-like Gene Family AT3G58690 33.333 1.17e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Alju11g0949 Pkinase 8.9e-27 CL0016