Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0937 ATGGATTATTCTTCATGGATTAACACTTCGTTGGACCTCAACCTTAATCCTAGTTCCGGAGTCACTGAAGAGATTTCTAAAAAGGAAGTGGAAAGCAAATTTTTTGCATTAGAGTTGAAGTCATCTCCTTCAAGACAAGAGAGGAGTGGTGATCAGGAGGAGGAATTGAAGAGGCTGCGTGCTGAAAACAAGAAGCTGACTGAAATGCTGACAGAGATGTGTGAGAATTACAATACTTTGAGGAACCATTTGTCTGAATATATGAGAAAGAACAATAACAATAATAGTTCAGAAAAGGAGATGAGCCCACCAAAGAAGAGGAAGTCTGATCACAGCAGCGATAATAACAACAGCAATCCAGTTGGGGTTTATGGAAACAATAACAACAATTCTGAGAGCAGCTCAACTGATGAAGAAGAATCAAGCAAGAAACCAAGGCAAGAGATCATCAAAGCAAAAATCTCCAAAGTTTATGTCAGAACACCAGCATCTGATACCACCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGCCAAAAGGTGACCAGAGACAACCCTTGTCCAAGAGCTTACTTCAAATGCTCTTTTGCTCCCTCATGCCCTGTCAAAAAGAAGGTCCAAAGAAGTGTGGATGATCAATCAATAGTGGTGGCAACTTATGAAGGAGAGCATAATCATGAACCTCCTTCTCATATGGAGGCTGCAGCATCAGGTTCAAGCAGAGGCTTAGTACAAGGCTCATCATCTTCTCTTAGACCTTCTCCTCCAAAAGTTGCAGTTGACATGAAAAGGTCAAAGTCCTTCAATGAATCCACAAACTCACTTCCAAAGCTAGATTCTTCTGAAGTTCCTCAGGTTTTGGTGGAACAGATGGCTACTTCCTTAACCAAGGATCCAAGTTTCAGATCAGCACTTTTAGCAGCCATTTCAGGAAGAATGTTGCACAAGAATTAG 960 0.4104 MDYSSWINTSLDLNLNPSSGVTEEISKKEVESKFFALELKSSPSRQERSGDQEEELKRLRAENKKLTEMLTEMCENYNTLRNHLSEYMRKNNNNNSSEKEMSPPKKRKSDHSSDNNNSNPVGVYGNNNNNSESSSTDEEESSKKPRQEIIKAKISKVYVRTPASDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSIVVATYEGEHNHEPPSHMEAAASGSSRGLVQGSSSSLRPSPPKVAVDMKRSKSFNESTNSLPKLDSSEVPQVLVEQMATSLTKDPSFRSALLAAISGRMLHKN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0937 319 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 315 IPR044810 GO:0003700
Alju11g0937 319 MobiDBLite consensus disorder prediction 89 147 - -
Alju11g0937 319 MobiDBLite consensus disorder prediction 242 256 - -
Alju11g0937 319 MobiDBLite consensus disorder prediction 38 60 - -
Alju11g0937 319 MobiDBLite consensus disorder prediction 114 135 - -
Alju11g0937 319 Gene3D WRKY domain 153 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g0937 319 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0937 319 MobiDBLite consensus disorder prediction 223 280 - -
Alju11g0937 319 SUPERFAMILY WRKY DNA-binding domain 166 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g0937 319 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0937 319 Coils Coil 49 76 - -
Alju11g0937 319 MobiDBLite consensus disorder prediction 44 60 - -
Alju11g0937 319 Pfam WRKY DNA -binding domain 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0937 319 FunFam WRKY transcription factor 40 155 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0937 Alju-ChrAlju11 11346799 11348162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0937 4 319 WRKY Transcription Factor Family AT1G80840 48.466 2.29e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju11g0937 WRKY 4.8e-23 CL0274