Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0935 ATGGCCAGAGTCAACGAACAAGCCCCGAATCAGAGCCAGAACGACTCGCCCCAGAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCAATTAGGTCAGGGAAATTTCGCCAAGGTCTATTACGCCAGGAATCTTGTGACGAACGAGAGCGTCGCGATTAAGGTGATCAAGAAAGAGAAGCTTAAGAAAGAGAGGCTGGTGAGGCAGATCAAGCAAGAGGTCTCTGTGATGCGATTGGTCCGGCATCCTCACATCGTCGAGCTCAAGGAAGTTATGGCCACAAAGGGAAAGATCTTTTTGGTTATGGAATATGTCAAAGGCGGAGAGTTGTTCTCCAAGGTCGCTAAAGGCAAGCTCAAAGAAGATGTCGCCAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGGGTTACTCACCGTGATCTGAAGCCTGAGAACCTTCTTCTGGACGAGAACGAAGATCTCAAGGTTTCCGATTTCGGGTTGTCGGCGTTGCCGGAGCAGCGTCGATCCGATGGAATGCTCCTCACGCCGTGCGGAACGCCGGCTTATGTGGCGCCGGAGGTTCTGAAGAAGAAAGGGTATGATGGATCTAAAGCTGATCTTTGGTCATGTGGCGTGATTCTCTATGCTCTGCTTTCTGGGTATCTGCCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAAGCATTCAAAGCTGAGTACGAATTCCCAGATTGGATTTCGCCCGAAGCTAAGAATTTGATCTCCAATCTTCTAGTCGCTGACCCAGAAAAGAGATACTCGATCCCATATATCATGAAGGACCCATGGTTTCAGATCGGATTCATGAGACCAATCGCGTTTTCGATTAAGAAGGAACCGGGTTTTGATTTCGATGAGGAGGAGAATGAAGTTAAAGAGAAAGAAGAAGGAGAAGTAGTGGTAAGATCAGAGAAACCATCTCGACCATTTTACAATGCGTTTGAGATAATCTCATCGTTGTCAAATGGGTTTGATCTGAGGAACTTGTTCGAGACACGAAAGAGGTCGCCGTCGATGTTCCTGTCGAAGCTTTCGGCTACGGCGGTCGTCGGGAAGCTTGAGACGGTGGCGAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGATTTCAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGGAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTCTCCAAGTCGGCAGGCGATACGCTCGAGTACATAAAGTTCTGTGAGGACGAAGTGAGGCCTGCACTGAAAGACATAGTATGGAGCTGGCAAGGAGACAGTAATAATAATAATCATAATAATAGTAATCAAAATTAA 1389 0.478 MARVNEQAPNQSQNDSPQSILFNKYEMGRQLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADLWSCGVILYALLSGYLPFQGENIMKIYKKAFKAEYEFPDWISPEAKNLISNLLVADPEKRYSIPYIMKDPWFQIGFMRPIAFSIKKEPGFDFDEEENEVKEKEEGEVVVRSEKPSRPFYNAFEIISSLSNGFDLRNLFETRKRSPSMFLSKLSATAVVGKLETVAKKLNFKITGRKDFKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYIKFCEDEVRPALKDIVWSWQGDSNNNNHNNSNQN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0935 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Alju11g0935 462 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0935 462 FunFam Non-specific serine/threonine protein kinase 321 445 - -
Alju11g0935 462 Gene3D Kinase associated domain 1, KA1 328 446 - -
Alju11g0935 462 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Alju11g0935 462 CDD CIPK_C 327 441 - -
Alju11g0935 462 Pfam NAF domain 325 380 IPR004041 GO:0007165
Alju11g0935 462 ProSiteProfiles NAF domain profile. 321 346 IPR018451 GO:0007165
Alju11g0935 462 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0935 462 FunFam Non-specific serine/threonine protein kinase 17 104 - -
Alju11g0935 462 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Alju11g0935 462 Coils Coil 53 73 - -
Alju11g0935 462 Gene3D Transferase(Phosphotransferase) domain 1 17 327 - -
Alju11g0935 462 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 441 - -
Alju11g0935 462 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0935 462 FunFam Non-specific serine/threonine protein kinase 18 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0935 Alju-ChrAlju11 11267084 11268472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0935 6 462 CBL-interacting serine-threonine protein kinases AT5G25110 62.144 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju11g0935 Pkinase 1.4e-76 CL0016