Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0929 ATGAGCAAACATCTCACTGCTGAAGAATGGACCTTAGAAGAAGGAGGCTTATCCAAAGTCTCTGGCTCATTGCCTCCCCCTACTGTCCCTCTTGGAAGAAAGGTAGGAGCTGAGTTTGTAGGAACCTTAATTCTCATGTTTGCTGGTATTTCCACTGCTATTGTGAACCAAAGGACACCAGGTTCTGAGACTCTAGTTGGGTGTGCTGCGTCTACTGGTCTTGCTGCTATGGTGGTCGTCCTCGCCACTGGGCACATCTCCGGTGCTCATCTCAACCCTGCAGTCACAATTTCCTTTGCTGCTTTAAAGCACTTCCCATGGAAACATGTTCCTGTGTATATTGGCGCACAAGTTATGGCGTCCATATGCGCAGCATTTGCTTTAAAGGGGATGTTTCACCCCTTCATGAGTGGAGGAGTCACAGTTCCTTCAGGAGGATATGCTCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTATTCTCATGTTTGTTGTCACAGCAGTGGCCACAGACACAAGAGCTGTGGGGGAGCTTGCTGCAATTGCAGTGGGAGCGACTGTCATGCTCAACATACTTGTAGCTGGGCCAGCAACAGGAGGATCAATGAACCCAGTGAGAACATTAGGTCCAGCTATTGCTACAAGTAACTACAAAGACATATGGGTCTACCTCATTGCTCCTATTCTAGGAGCTCTTGGTGGGGCAGGAATCTACACTGCAGTCAAGCTTCCAGAAGCGGACGGTGAAACACAAGGAAAGGATTCAACGCCCCGGAGATTCAGAAAGTGA 789 0.4816 MSKHLTAEEWTLEEGGLSKVSGSLPPPTVPLGRKVGAEFVGTLILMFAGISTAIVNQRTPGSETLVGCAASTGLAAMVVVLATGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQVMASICAAFALKGMFHPFMSGGVTVPSGGYAQAFALEFIISFILMFVVTAVATDTRAVGELAAIAVGATVMLNILVAGPATGGSMNPVRTLGPAIATSNYKDIWVYLIAPILGALGGAGIYTAVKLPEADGETQGKDSTPRRFRK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0929 262 SUPERFAMILY Aquaporin-like 30 247 IPR023271 -
Alju11g0929 262 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 CDD MIP 33 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 Gene3D Glycerol uptake facilitator protein. 27 256 IPR023271 -
Alju11g0929 262 Pfam Major intrinsic protein 31 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju11g0929 262 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Alju11g0929 262 PANTHER AQUAPORIN NIP2-1 24 246 IPR034294 -
Alju11g0929 262 FunFam Aquaporin NIP2-1 22 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0929 Alju-ChrAlju11 11152382 11154955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0929 8 262 Major Intrinsic Protein MIP AT1G80760 76.078 6.86e-135 381