Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0927 ATGCCTCAAGCCTATAATGGTGGGCACAGAGCACTTATTGTTGTTACATCATATACAAATCCCATCTTTCTTGCTGTTAAACCAAACTTCAATCTCCCCCATAAAGAGGTGATCTTGGCATATATATTTCTTCCCCATATGGACCTTCAAAGATCAGAGCCATGTTCATCTGCAGAACCCTCAATGGATTGCCAAACTGAGAAGAGAGACACACAAAAAGATGATCAAACACAACAACACCCACATGACTCAGCTCCTCTTCTTCTGAATCTAAACCTCTCTAATGAGGAATCAGTGGATGGATCAAAGCCAGAACTCAACCTCATCAACTGTTTTGATTCCAAGTCATCCTTAAACTCCTCAGAATCTTCTCATGACTTGGAACCTCGGATTTTCTCATGCAACTACTGTCAGAGAAAGTTTTATAGCTCACAAGCTCTTGGAGGTCACCAGAATGCACACAAGCGTGAGAGGACTTTGGCGAAAAGAGGACATAAAGTTGGAGCTGCAATTTCAGTAGAATTTGGACAAAGGTACACTAGCATGGCTTCTTTGCCTTTGCATGGCTCATATAACAGATCACTTGGGATTCAAACACATTCAATGATTCACAAACCCTCTTATCAAGCTCCCAATACTCTTGGCTTACCGCGATTACATGCTCAAAATGCCTGGTGGAGGAAGCCTTTAGATTCACAACCTACAATTGGGAAGCTTCCTTCTGGAGGAAAAGTTCATATTGGAGATGAAACTGAAGCTTCCTTTTCTGGTGGAGTTTCGAGGTCAAAGAAGTTTTCTCCAAATATGGTGGTCAAAGAAGGAATTGGAGCTTACTGGTTGGGAAGTGTTACTCATGTAAAATCTAAACAAGAAGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 909 0.4158 MPQAYNGGHRALIVVTSYTNPIFLAVKPNFNLPHKEVILAYIFLPHMDLQRSEPCSSAEPSMDCQTEKRDTQKDDQTQQHPHDSAPLLLNLNLSNEESVDGSKPELNLINCFDSKSSLNSSESSHDLEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKVGAAISVEFGQRYTSMASLPLHGSYNRSLGIQTHSMIHKPSYQAPNTLGLPRLHAQNAWWRKPLDSQPTIGKLPSGGKVHIGDETEASFSGGVSRSKKFSPNMVVKEGIGAYWLGSVTHVKSKQEELQKLDLSLKL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0927 302 Gene3D Classic Zinc Finger 110 178 - -
Alju11g0927 302 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 47 302 IPR044246 GO:0009788
Alju11g0927 302 ProSitePatterns Zinc finger C2H2 type domain signature. 134 154 IPR013087 -
Alju11g0927 302 ProSiteProfiles Zinc finger C2H2 type domain profile. 132 159 IPR013087 -
Alju11g0927 302 SUPERFAMILY beta-beta-alpha zinc fingers 129 159 IPR036236 -
Alju11g0927 302 FunFam Zinc finger protein 2 110 178 - -
Alju11g0927 302 Coils Coil 286 302 - -
Alju11g0927 302 MobiDBLite consensus disorder prediction 63 80 - -
Alju11g0927 302 MobiDBLite consensus disorder prediction 53 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0927 Alju-ChrAlju11 11138691 11140774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0927 89 302 C2H2 Transcription Factor Family AT5G25160 48.230 3.23e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju11g0927 None None None