Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0923 ATGGCCAGACCCCAACAACGCTATCGAGGTGTGCGCCAGAGGCACTGGGGCTCATGGGTTTCCGAAATCCGCCACCCTCTTCTGAAGACGAGAATATGGCTGGGGACGTTCGAAACGGCGGAGGATGCGGCTAGAGCTTACGACGAAGCGGCGAGGCTGATGTGTGGAACAAAGGCAAGAACCAATTTTCCGTTTAATCCCAATGAGCCACAATCGTCTTCTTCAAAGTATCTCTCTGCAACTTTGACGGCGAAGCTTCACAAGTGTCACATGGCCTCGCTCTCACTTCAAATGGCTAATAAACAGAAACAGCCACAACAACTACAAGAACAACACCCTCAGAGGATTACCTATAGTGACAATAACCAAAACAACCCATTTGCCGCCGGCAATGCCGGTGCCGGAACGAGTTCCGATGGGGGATTCCGGTGGCCGGAGATGAGACCTGAGGAATCTAAATGGGTGGTAGAAGGCCCGGGTGAAGAAGTTGGGCCTGTACTTGAAGATGATCACATAGAGCAAATGATTCAGGAATTGCTTCATTATGGCTCTGTTGAGCTCTGTTCTCTTGGCTCAGCCTAG 582 0.5103 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGTKARTNFPFNPNEPQSSSSKYLSATLTAKLHKCHMASLSLQMANKQKQPQQLQEQHPQRITYSDNNQNNPFAAGNAGAGTSSDGGFRWPEMRPEESKWVVEGPGEEVGPVLEDDHIEQMIQELLHYGSVELCSLGSA 193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0923 193 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Alju11g0923 193 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Alju11g0923 193 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Alju11g0923 193 MobiDBLite consensus disorder prediction 98 132 - -
Alju11g0923 193 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Alju11g0923 193 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Alju11g0923 193 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Alju11g0923 193 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Alju11g0923 193 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Alju11g0923 193 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 131 - -
Alju11g0923 193 MobiDBLite consensus disorder prediction 98 145 - -
Alju11g0923 193 FunFam Ethylene-responsive transcription factor 2 6 66 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju11g0923 Alju-ChrAlju11 11086904 11087569 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0923 1 190 AP2-EREBP Transcription Factor Family AT5G25190 55.721 7.06e-69 206
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju11g0923 AP2 1.1e-11 CL0081