Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0917 ATGAATCACAATTTCTTCTTCCTTCCCGACCCATCACTACCATGCAGTTGGCCGGTTACCACCACAAACGTGCAACCTTCACCACCACCTCTGGAGGGGATCGCCGCCGTGGTAGGTGAGCACGTGCTCTTCGGACTCAGCCACACAACAACCTCCACCACTGTTACCAGGAACAACAAAAAGGACAACAACCTTAACGGCCCCAAAAGTTTCATGCCGGTGCAGAAACAGGGAACTCTGTCGTCGGTGAACAAGAGCTACAGGGGAGTGAGGAAGAGGCCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGAATCGGGCGGTGCCGGCACTGGCTGGGCACTTTCGATACGGCGGAGGAGGCGGCCCGTGCGTATGACGCGGCGGCGAGGCGACTGAGGGGCGCCAAGGCCAGGACCAACTTCGAGATATCGTCGGTGCTGCCGTCGTTGTCGCCGCCGTCTTCATCGTCTTCAAATTCAAGCTCAGAAGTAGTGAAAGGCAAAGGGAAGGGTTTGGGGAATAATAACAAGAAATGCTGTGTTGTTAACTCTTTGGCTCAATTGTTCAGTGTGGCGCCTGAGACCGTGAGAGTAAAAAATAATGATAGTAATGAGAAGATGACTGGTTCAAGTTCTTCAGGTTTTGGTAACAATGTAGAACTAGACTTGAAGCTAGGTAGATCCACTAGAATGGTCGTGTAG 705 0.5319 MNHNFFFLPDPSLPCSWPVTTTNVQPSPPPLEGIAAVVGEHVLFGLSHTTTSTTVTRNNKKDNNLNGPKSFMPVQKQGTLSSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEISSVLPSLSPPSSSSSNSSSEVVKGKGKGLGNNNKKCCVVNSLAQLFSVAPETVRVKNNDSNEKMTGSSSSGFGNNVELDLKLGRSTRMVV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0917 234 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Alju11g0917 234 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Alju11g0917 234 MobiDBLite consensus disorder prediction 53 74 - -
Alju11g0917 234 MobiDBLite consensus disorder prediction 147 171 - -
Alju11g0917 234 FunFam Ethylene-responsive transcription factor 2 85 144 - -
Alju11g0917 234 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Alju11g0917 234 Gene3D AP2/ERF domain 85 145 IPR036955 GO:0003700|GO:0006355
Alju11g0917 234 Coils Coil 119 139 - -
Alju11g0917 234 CDD AP2 85 144 IPR001471 GO:0003700|GO:0006355
Alju11g0917 234 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 63 201 - -
Alju11g0917 234 MobiDBLite consensus disorder prediction 147 166 - -
Alju11g0917 234 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Alju11g0917 234 SUPERFAMILY DNA-binding domain 86 145 IPR016177 GO:0003677
Alju11g0917 234 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0917 Alju-ChrAlju11 11031316 11032020 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0917 32 149 AP2-EREBP Transcription Factor Family AT1G80580 60.976 3.67e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju11g0917 AP2 2.8e-15 CL0081