Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0915 ATGGATCAGCTTTCTTGGGATGCTTGGCTCTCTGAACTGGAAATGGAAAACGAATCTGTTTTTTTAAGGGGAAGAAACTCGGGGCCGGATGAAGAAAAAGCTGGAGAGTGTTTTCTCAGAGATATCTTACAGGACCCAACTAATTTATCTTCTGAGAGTGAGGCCATTTTTGCTCCGGCCACCGTGGCGGGCGGTGGCGCCACCACCAACTCCGTCTTGAACTCTCTACAGTGTGCTTCTCACACAACACCACTAAACCCCTGCGTTCTGTCTTTCGATAAATCCATTGTCATACCAGACATCGCAGACCCTAGCAGTTATTCTTCTTCGAAGCTCAAACGGCGCATTGAAGCAGTTAACGATGAACCGCCGCCGGTGGACGCCGTCGGAGGAACAAAGAAGACTAGAAGCGGTGCTGATGCGACGGATCACATAATGGCTGAGAGAAGAAGGAGACAGGAACTCACAGAAAGGTTCATAGCTCTCTCAGCCACCATCCCTGGCTTGAAAAAGATTGATAAGGCGACTGTACTGAGCGAAGCTATAAGCTACGTGAAGCAACTTCAAGAGCGTGTGAAGGAGCTAGAGCAAGATACGAACAACAAGATGATAATAACGGAGAAGCCCTATCATCAGGTGGTGCCGTGTTCTGGAGATGATGATGATGATAATGTTGACGGAGGCACGCCGCCGGCGATGAGTGAAGTGAACTACTTCGACGGTGACGGCGACAACAATGTAGTGCTGCCTGAGGTGAAAGCAAGAATCTCTGACAACAAACAAGTGCTGATAAGAATCCTGTGCAAGAAACAGAAATCCACCATGGTTAGAATCCTCGATGAGCTCAAAAGCCTTCATCTCAATGTCTCTGGTAATAGTGTCATGCCCTTCGGCTCCTCTACTCTTGATGTCACCATCATTGCGCAGATGAGTGAGGAATACAGGGTACCGGTGGAGAATATAGTGAAAAGCCTAAGGATGGCTCTAAAGTGTAATGGAGATCCTTGCTAG 1011 0.4807 MDQLSWDAWLSELEMENESVFLRGRNSGPDEEKAGECFLRDILQDPTNLSSESEAIFAPATVAGGGATTNSVLNSLQCASHTTPLNPCVLSFDKSIVIPDIADPSSYSSSKLKRRIEAVNDEPPPVDAVGGTKKTRSGADATDHIMAERRRRQELTERFIALSATIPGLKKIDKATVLSEAISYVKQLQERVKELEQDTNNKMIITEKPYHQVVPCSGDDDDDNVDGGTPPAMSEVNYFDGDGDNNVVLPEVKARISDNKQVLIRILCKKQKSTMVRILDELKSLHLNVSGNSVMPFGSSTLDVTIIAQMSEEYRVPVENIVKSLRMALKCNGDPC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0915 336 Gene3D - 132 203 IPR036638 GO:0046983
Alju11g0915 336 SMART finulus 145 194 IPR011598 GO:0046983
Alju11g0915 336 Coils Coil 178 205 - -
Alju11g0915 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Alju11g0915 336 MobiDBLite consensus disorder prediction 121 141 - -
Alju11g0915 336 PANTHER BHLH TRANSCRIPTION FACTOR 79 329 - -
Alju11g0915 336 Pfam Helix-loop-helix DNA-binding domain 143 189 IPR011598 GO:0046983
Alju11g0915 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 212 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0915 Alju-ChrAlju11 10935993 10938312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0915 131 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.580 2.39e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju11g0915 HLH 1.8e-09 No_clan