Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0914 ATGTATGATCAATATGTCTTCACTCAGATGCATTCACCCCCTTTCAATGACGATGACTTTTTCAGCGACACATTTCACCAAACAGGTGGCAGTCTCTGTTCTCAAGGAGAACCGTCAGATCAAATCTCCTCCTCCACCATCACCACCGTCGCCGCCGCCGACAACAATGGCTTCCCTGGCAGCAGCCTATTCTCCAACAACAACCCGAAGCAACTCGCAGCTTCAGCCTTCACCCTTTCCTTTGATAACTCCATCGTTATCCCCATCCCCAACTCGTCGCCACCAGGACGAACCCGATCCACTCGTAACACTCAACCCAGAAACAAGTCCAGATCCTCCTCTGATGTTCGTCATCACATTATGGCCGAGAGGAAGAGAAGACGAGACCTCACTCAAAAGTTCATCGCACTCGCCGCCACCATCCCTGGCTTGAAGAAGATGGACAAGGCGACTGTACTTTGTGAGGCGATCGATTACGTGAAGCGACTTCAAGAGAGGGTGAGAGAGTTAGAGAGTGTTGAAGAGAAGAGGAGGAGAAATGGAGGAGGAGGAACGGCGGTGAGGAGAGAGAAGAATTCAACGGATTTGTGTTGGTGTCGTCGGAGAGCAAAGGAAGCTGTTGTTGTTGAACTTCCGGAAATGGAAGCGAAGGTGTCGGAGAATCAAGTTCTGATTCGGATTCACTGTGAGAGACGAAGCGATATGATGCTGAAAATGACGGAGATTCTTGAATATGTTCATCTCTCTGTCTTGAGCTGTAGCTCTCTGGCTTTTGGAAACTCTGCTTTTAGCATCACCATTGTTGCTCAGATGAAGGAGAAATACAACATGAAGGTGAATGATTTAATAAAGTATTTGAGGCAACATGTGTTCAAATCCCATGATGTTCGGTAG 894 0.4787 MYDQYVFTQMHSPPFNDDDFFSDTFHQTGGSLCSQGEPSDQISSSTITTVAAADNNGFPGSSLFSNNNPKQLAASAFTLSFDNSIVIPIPNSSPPGRTRSTRNTQPRNKSRSSSDVRHHIMAERKRRRDLTQKFIALAATIPGLKKMDKATVLCEAIDYVKRLQERVRELESVEEKRRRNGGGGTAVRREKNSTDLCWCRRRAKEAVVVELPEMEAKVSENQVLIRIHCERRSDMMLKMTEILEYVHLSVLSCSSLAFGNSAFSITIVAQMKEKYNMKVNDLIKYLRQHVFKSHDVR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0914 297 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 163 IPR011598 GO:0046983
Alju11g0914 297 Coils Coil 160 180 - -
Alju11g0914 297 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 178 IPR036638 GO:0046983
Alju11g0914 297 PANTHER BHLH TRANSCRIPTION FACTOR 7 293 - -
Alju11g0914 297 MobiDBLite consensus disorder prediction 88 110 - -
Alju11g0914 297 MobiDBLite consensus disorder prediction 88 119 - -
Alju11g0914 297 SMART finulus 120 169 IPR011598 GO:0046983
Alju11g0914 297 Pfam Helix-loop-helix DNA-binding domain 118 164 IPR011598 GO:0046983
Alju11g0914 297 Gene3D - 104 180 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0914 Alju-ChrAlju11 10896394 10898049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0914 99 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.974 2.95e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju11g0914 HLH 4.2e-09 No_clan