Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju11g0907 | ATGGATACAAGTGATTGGAGAACTCAACTGCAACCTAATTCACGCGAAAGAATTATCAACAAAATAATGGATGCATTAAAGAGACATCTTTGCATTTCTGGTCAAGATGGATTGCATGAATTGCGCAAAATTGCTCAAAGGTTTGAAGATAAGATTTATACTGCTACAACAAGCCAGTCTGATTATCTTCGGAAAATATCTTTGAAGATACTTACAATGGATAATAAAACCCAGAATACCATGGTCAACCCTACGCAATCAAATGCAGGTGGCCCTAGCTACAAGCCTATTGATTCAGGAATTCCTATGCAGTCTCAAGTTCACAATCCAGGGCAGTCACATGCTATTCCAGTGCCTAATCAGAATCAGCAAGCCAGTAATGTTCAACAGCCAACGCAACCTATACTGCAGCAAGAGGCCCAATCTGTTATCAGGCAACAACAACAACAAAATACATCGATTAATAACCAGCAACAAATCCCAATTTCTCAACAGCCAATATTGGCTCCACAGCAGCAGCAGCACCTTCTAGCGCTACAGTCAAATGTAACAAGCATGCAACACCCTCAGCTACTTGGGCAACAGAATGATGTTGATATGCAGAAACATCTGAGATCGCTTGTTGGGCAGCAGAATAATCTTCCAATCCTGCAGCTGCACCAGCAGCAGTTGATAAATCAGCAAAACAATCTCGCCAACATGCATCAGCAACAGTTGGGAAGTAAGATCCCAGGTTTACAACTACAACAGAAGCTTGCAACTCAGTCTGGCAACTCAGGCTTGCAGACTAACCCCTTGCAACGAGATATGCAGCAAAGACTTCAGGCTTCGAGTTCTTTGCTTCAACAGCAAAATGTACTACTTGATCAACAAAAGCAATTATGTCAGTCACAAAGAGCTCTTCCAAACTCATCATCAACTTCTCTAGATTCAACAACACAGACCAGAAGACCTGAAGAGGATGATTGGAAAGAAGAGGTGTACGAAAAGATCAAGTCCATGAAAGAATCATACTTGCCAGAATTGTCTGAAATGCACCAGAAAATTGAAGCTAAACTTCAGCAGCTTGAAGCCCTTCCAGATGGACCCAGGTCAGATCAACTTTCAAAGCTGAAGATATTCAAAACATTGTTGGAGCGTCTCATGGCATTTCTACAGGTTTCTAAGAGCAGTGTTCTGCCTAGTTTCAAGGAAAAATTTGTTTCATATGAGAAGCAGATCTTAACCTTTATAGAAACAAATAGGCCGAGGAAAGCTATGTCTTCTATGCAGAGAGGACAACTTCCTCCACCTCATATGCACCCAGTACCAGAGTCACAATCCCAACTTACTCAAGTGCAATCTCATGAAAATCAAATGAACTCTCAGATGCAATCAACAAACTTTCAGAGTTTTGTGAATTTCCTGCAGCAGGCTGGAGCGAGCTCCCTTCAACAAAACTCTCTGAATGCTCCTCAACAGCAAAATGTACTTGATCAACAAAAGCAATCATATCAGTCGCAAAGAACTCTTCCTGTTTCATCATCATCTTCTCTAGGTTCAACTGCACTGACTGGAAAATCTGGTGGGGATGATTGGCTAGAAGAGGCTTACCAAAAGAAAAAGAATGTGAGGAAGTCTCCTGAACCCCCTAAAGAGCCAGTTTTCAACTGCCCAATATGTATGGATCCTTTGGTAGAAGAAATGTCAACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCAATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGCTAATGTGAAAGAGCTCATAAGGGTTTTTCTCCCATCAGCTAGTTGA | 1821 | 0.4157 | MDTSDWRTQLQPNSRERIINKIMDALKRHLCISGQDGLHELRKIAQRFEDKIYTATTSQSDYLRKISLKILTMDNKTQNTMVNPTQSNAGGPSYKPIDSGIPMQSQVHNPGQSHAIPVPNQNQQASNVQQPTQPILQQEAQSVIRQQQQQNTSINNQQQIPISQQPILAPQQQQHLLALQSNVTSMQHPQLLGQQNDVDMQKHLRSLVGQQNNLPILQLHQQQLINQQNNLANMHQQQLGSKIPGLQLQQKLATQSGNSGLQTNPLQRDMQQRLQASSSLLQQQNVLLDQQKQLCQSQRALPNSSSTSLDSTTQTRRPEEDDWKEEVYEKIKSMKESYLPELSEMHQKIEAKLQQLEALPDGPRSDQLSKLKIFKTLLERLMAFLQVSKSSVLPSFKEKFVSYEKQILTFIETNRPRKAMSSMQRGQLPPPHMHPVPESQSQLTQVQSHENQMNSQMQSTNFQSFVNFLQQAGASSLQQNSLNAPQQQNVLDQQKQSYQSQRTLPVSSSSSLGSTALTGKSGGDDWLEEAYQKKKNVRKSPEPPKEPVFNCPICMDPLVEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKANVKELIRVFLPSAS | 606 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju11g0907 | 606 | MobiDBLite | consensus disorder prediction | 477 | 524 | - | - | |
Alju11g0907 | 606 | FunFam | Mediator of RNA polymerase II transcription subunit 15a | 5 | 83 | - | - | |
Alju11g0907 | 606 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED | 423 | 534 | IPR044661 | GO:0003713|GO:0031490 | |
Alju11g0907 | 606 | SUPERFAMILY | RING/U-box | 550 | 594 | - | - | |
Alju11g0907 | 606 | MobiDBLite | consensus disorder prediction | 437 | 457 | - | - | |
Alju11g0907 | 606 | Pfam | Zinc finger, C3HC4 type (RING finger) | 550 | 588 | - | - | |
Alju11g0907 | 606 | ProSiteProfiles | Zinc finger RING-type profile. | 551 | 589 | IPR001841 | - | |
Alju11g0907 | 606 | MobiDBLite | consensus disorder prediction | 297 | 324 | - | - | |
Alju11g0907 | 606 | Coils | Coil | 339 | 359 | - | - | |
Alju11g0907 | 606 | MobiDBLite | consensus disorder prediction | 418 | 457 | - | - | |
Alju11g0907 | 606 | Gene3D | Coactivator CBP, KIX domain | 5 | 83 | IPR036529 | GO:0003712|GO:0006355 | |
Alju11g0907 | 606 | Pfam | KIX domain | 4 | 82 | IPR036546 | - | |
Alju11g0907 | 606 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 519 | 605 | IPR013083 | - | |
Alju11g0907 | 606 | MobiDBLite | consensus disorder prediction | 477 | 518 | - | - | |
Alju11g0907 | 606 | MobiDBLite | consensus disorder prediction | 297 | 313 | - | - | |
Alju11g0907 | 606 | SUPERFAMILY | Kix domain of CBP (creb binding protein) | 3 | 79 | IPR036529 | GO:0003712|GO:0006355 | |
Alju11g0907 | 606 | ProSitePatterns | Zinc finger RING-type signature. | 566 | 575 | IPR017907 | - | |
Alju11g0907 | 606 | Coils | Coil | 217 | 237 | - | - | |
Alju11g0907 | 606 | SMART | ring_2 | 551 | 588 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju11g0907 | Alju-ChrAlju11 | 10772819 | 10789669 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju11g0907 | 549 | 604 | C3H Transcription Factor Family | AT5G48655 | 76.786 | 1.34e-26 | 105 |