Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0873 ATGGCCGTTGTTTCTCTCTCTCTTCAACCTTTTCTGCATCCCTCCTCCGCTCCTTCGTCGTCGTTGTCGTCCTCCTCCTCCTCTTTTTTATGCGGTAGTGTCCGTCTTCGGACCCACAAGAACTTCATATCTATCCATTCTCCTTCCCATTTTCCTTTTTTGACATTAACTAATAAGACCTCCTCGAGGAGCTTCCGAACGGCGATTGCTGCCTCTGGCGACTATTATGCGACTCTTGGAGTCTCCAAATCCGCGACTAACAAGGAGATTAAGACGGCTTATCGAAAGTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTATTGACAAGTTCAAGGAAATTAGTGCTGCATATGAGGTTCTATCAGATGATAAGAAGAGGGCCTTGTATGATCAATATGGAGAGGCTGGCGTTAAGAGTGCAGTAGGAGGATCAAATGCTTATACGACTAATCCATTTGATTTGTTTGAGACATTTTTCGGGCCAAGTATGGGTGGCTTTGCTGGCATGGATCCAACTGGATTTGGAACACGCCGCCGCAGTACTGTTATTAAGGGTGAAGACATTCGTTATGATATTTTGCTGGGATTTTCTGAGGCAATTTTTGGAGCTGAAAAGGAATTTGAGCTTTCCCATCTGGAAAAGTGTGAAGCTTGTAATGGTACTGGAGCAAAGGTTGGCTCCAAGATGAGAATATGTTCGACTTGTGGTGGTAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGTTTGTTCTCACAGGTTTCAGTATGTCCAAACTGTGGAGGGGATGGTGAAATCATATCTGAATTTTGTCGAAAATGTAATAGTGAAGGACGTATTCGGGTTAAAAAAATTATTAAAGTGAAAGTTCCTCCAGGTGTTAGCTCAGGCAGTATTCTGAGAGTTGCTGGGGAGGGAGATGCTGGACCTCGAGGGGGTCCTCCTGGCGATCTATTTGTGTATCTTGAAGTGGAAGAGATTCCAGGAATTCAAAGAGATGGCATTAATCTCTCTTCAACGATAACAATAAGTTATCTGGATGCCATACTGGGGGTTGTTGTCAAGGTAAATACAGTTGAAGGCATTTCTGAACTACAAATTCCCCCCGGTACCCAACCTGGAGATGTCCTTGTCCTTGAAAGGAAAGGTGTGCCAAAATTAAACAAACCATCAATACGTGGTGACCACTTATTTGCAGTTAAAGTTACAATACCAAAACGTATCAGTTCAAAGGAGCGCAAGTTGCTTGAGGAACTTGCATCACGAGGCAGCAAAACGAGTAGCCCTTCAAAACCCCGTCCCAGCATTCACTCTTCCAAGGGAAGGGCTGAAAGTCCTGTTGCTCAAAGTGCTGAAAGTCCAACAGTGGTTGAAGAAAAAACTGAACAGTCAGAAGACCAAGATGACATATGGAATAAATTAAAGAATTTTGCTGGGTCGGTCGCAAATGGAGCTCTGAAGTGGCTAAAAGATAACCTGTAA 1500 0.4413 MAVVSLSLQPFLHPSSAPSSSLSSSSSSFLCGSVRLRTHKNFISIHSPSHFPFLTLTNKTSSRSFRTAIAASGDYYATLGVSKSATNKEIKTAYRKLARQYHPDVNKEPGAIDKFKEISAAYEVLSDDKKRALYDQYGEAGVKSAVGGSNAYTTNPFDLFETFFGPSMGGFAGMDPTGFGTRRRSTVIKGEDIRYDILLGFSEAIFGAEKEFELSHLEKCEACNGTGAKVGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEIISEFCRKCNSEGRIRVKKIIKVKVPPGVSSGSILRVAGEGDAGPRGGPPGDLFVYLEVEEIPGIQRDGINLSSTITISYLDAILGVVVKVNTVEGISELQIPPGTQPGDVLVLERKGVPKLNKPSIRGDHLFAVKVTIPKRISSKERKLLEELASRGSKTSSPSKPRPSIHSSKGRAESPVAQSAESPTVVEEKTEQSEDQDDIWNKLKNFAGSVANGALKWLKDNL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0873 499 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
Alju11g0873 499 MobiDBLite consensus disorder prediction 427 441 - -
Alju11g0873 499 Gene3D - 336 428 - -
Alju11g0873 499 SUPERFAMILY Chaperone J-domain 72 179 IPR036869 -
Alju11g0873 499 FunFam Chaperone protein dnaJ A6 chloroplastic 220 284 - -
Alju11g0873 499 Gene3D DnaJ domain 71 174 IPR036869 -
Alju11g0873 499 ProSiteProfiles Zinc finger CR-type profile. 207 289 IPR001305 GO:0031072|GO:0051082
Alju11g0873 499 SMART dnaj_3 73 130 IPR001623 -
Alju11g0873 499 MobiDBLite consensus disorder prediction 448 463 - -
Alju11g0873 499 Gene3D - 190 326 - -
Alju11g0873 499 Gene3D - 220 284 - -
Alju11g0873 499 PRINTS DnaJ domain signature 130 149 IPR001623 -
Alju11g0873 499 PRINTS DnaJ domain signature 76 94 IPR001623 -
Alju11g0873 499 PRINTS DnaJ domain signature 94 109 IPR001623 -
Alju11g0873 499 PRINTS DnaJ domain signature 110 130 IPR001623 -
Alju11g0873 499 FunFam Molecular chaperone Hsp40/DnaJ family protein 336 428 - -
Alju11g0873 499 FunFam Putative Mitochondrial DnaJ chaperone 278 326 - -
Alju11g0873 499 NCBIfam molecular chaperone DnaJ 74 427 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Alju11g0873 499 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 287 IPR036410 -
Alju11g0873 499 SUPERFAMILY HSP40/DnaJ peptide-binding domain 337 422 IPR008971 GO:0006457|GO:0051082
Alju11g0873 499 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 22 432 - -
Alju11g0873 499 CDD DnaJ_zf 220 284 IPR001305 GO:0031072|GO:0051082
Alju11g0873 499 MobiDBLite consensus disorder prediction 425 474 - -
Alju11g0873 499 FunFam Chaperone protein dnaJ A6 chloroplastic 71 176 - -
Alju11g0873 499 Pfam DnaJ domain 74 135 IPR001623 -
Alju11g0873 499 ProSiteProfiles dnaJ domain profile. 74 138 IPR001623 -
Alju11g0873 499 Hamap Chaperone protein DnaJ [dnaJ]. 71 483 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Alju11g0873 499 CDD DnaJ_C 191 414 - -
Alju11g0873 499 CDD DnaJ 74 127 IPR001623 -
Alju11g0873 499 Pfam DnaJ central domain 220 284 IPR001305 GO:0031072|GO:0051082
Alju11g0873 499 SUPERFAMILY HSP40/DnaJ peptide-binding domain 188 340 IPR008971 GO:0006457|GO:0051082
Alju11g0873 499 Pfam DnaJ C terminal domain 193 411 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0873 Alju-ChrAlju11 10343822 10350307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0873 75 180 C2H2 Transcription Factor Family AT1G74250 36.842 1.30e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0873 11 10343822 10350307 Alju11g0873 11 10343822 10350307 ECH