Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0847 ATGGCGCAAATTTTGCTTCATGGGACTCTCCATGTCACGATCTTTGAGGTGGATAGGCTGAAGACTGGTGGTGGCAAGTTCTTCAGCAAGCTCAAGGAAAATTTTGAGGAGGCAGTTGGTTTTGGAAAGGGAGTCACAAAACTCTATGCAACCATTGATCTTGAGAAGGCCAGAGTTGGAAGGACTAGAATTCTGGAAAATGAACATTCCAACCCGAGGTGGTATGAATCTTTTCACATTTATTGTGCTCACATGGCTTCTGATATTATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGAGCACATGTGCCTGTTACGGATGTCTTGGATGGTGAGGAAATAGACAGGTGGGTTGAAATCTTGGATGAGCACAAGAATCCCATTCATGGTGATTCAAAAATCCACGTGAAACTGCAATATTTTGATGTCACCAAAGATTGCAGCTGGGCTCGCGGTATTAGAAGTGCTAAATTTCCTGGAGTTCCATACACTTTCTTCTCACAGAGACGAGGGTGTAAGGTGTCTCTGTACCAAGATGCTCATATCCCAGATAGATTTCTCCCTGAAATACCTCTTGCTGGAGGTGAGAAATATTCTCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACTAATGCCAAGCACTTAATATACATTACCGGTTGGTCTGTATATACTGAGATCTCCTTGGTAAGGGATAAAAGGAGGCCAAAGCCAGGGGGAGACATAATGATTGGTGAGCTCCTCAAGAAAAAGGCAAGTGAAGGTGTCAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCTGTTGGTTTGTTAAAAAAAGATGGATTGATGGCTACTCATGATGAAGAAACTTTGCATTACTTCCAGGGCACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGACGGGGGAAGCATTATTCAGGACTTGCAAATTTCTACCATGTTCACCCATCATCAGAAGATTGTGGTGGTGGACAGTGAATTGCCAAGTGGAGGATCAGACAGGCGAAGAATTGTTAGTTTTGTTGGGGGTATTGATCTCTGTGACGGTAGATATGATACTCCCTTCCACTCGCTGTTCAGAACTCTGGACACAGCACACCATCATGACTTTCATCAACCCAACTTCCCTGGTGCTGCGATCACAAAAGGTGGTCCCAGAGAGCCTTGGCATGACATCCATTCCCGGCTTGAAGGACCCATTGCTTGGGATGTTTTATTTAACTTTGAACAAAGATGGAGGAAGCAAGGTGGGAAGGATGTGCTTATTCAGTTGAGAGAGCTTGAAGATGTCATCATTCCTCCATCCCCAGTTATGTATCCTGATGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATTGATGGTGGAGCTGCTTTTGGGTTTCCAGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTCATTAGTGGGAAAGATAATATCATTGATCGTAGTATTCAGGATGGTTATATCAATGCCATTCGGCGAGCAAAGGATTTCATTTATATTGAAAATCAGTACTTCCTTGGAAGCTCTTTTGCTTGGAGCGCTGATGATATCAAACCTGAGGACATAAATGCTTTGCATGTCATCCCAAAGGAGCTTTCACTTAAAATCGTTAGCAAGATCGAAGCTGGGGAGAGATTCACTGTATATGTTGTGGTCCCAATGTGGCCAGAGGGTGTCCCTGAAAGTGCATCAGTGCAGGCAATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTACAAGGATGTTATTCAGGCACTTAGGGCCAATGGAATCGATGAAGATCCTCGCAACTATTTGACATTCTTCTGCCTCGGTAATCGGGAGTTGAAGAAACCTGGAGAATACGAGCCTTCAGAAAGACCTGATCCTGATTCTGATTATTTGAGAGCTCAAGAGGCTCGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGACGAGTACATAATCATAGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCTAGGGACTCAGAGATTGCCATGGGTGCTTATCAACCCTATCATTTGGCTCACAGGCAACAGCCGGCACGGGGTCAGATCCATGGTTTCCGCATGTCGTTGTGGTACGAGCACCTTGGCATGCTCGACGATTCCTTCGTCACACCTCAAAGCGAAGAATGTGTCAGGAAGGTGAACCAGATGGCTGAAAAGTACTGGGACCTCTATTCAAGTGAGTCGCTGGAACAAGACCTTCCTGGACACCTGCTTCGCTATCCCATTGGTATTTCTGAAGAAGGAGAAATCACAGAGGTTCCTGGATTTGAATTCTTCCCAGACACCAAGGCTCGTGTTCTCGGAGGCAAATCTGACTACATGCCACCAATCCTTACAACTTAG 2427 0.4462 MAQILLHGTLHVTIFEVDRLKTGGGKFFSKLKENFEEAVGFGKGVTKLYATIDLEKARVGRTRILENEHSNPRWYESFHIYCAHMASDIIFTVKDDNPIGATLIGRAHVPVTDVLDGEEIDRWVEILDEHKNPIHGDSKIHVKLQYFDVTKDCSWARGIRSAKFPGVPYTFFSQRRGCKVSLYQDAHIPDRFLPEIPLAGGEKYSPHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDKRRPKPGGDIMIGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETLHYFQGTDVHCVLCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSELPSGGSDRRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHHDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLIQLRELEDVIIPPSPVMYPDDHETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDGYINAIRRAKDFIYIENQYFLGSSFAWSADDIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDVIQALRANGIDEDPRNYLTFFCLGNRELKKPGEYEPSERPDPDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLAHRQQPARGQIHGFRMSLWYEHLGMLDDSFVTPQSEECVRKVNQMAEKYWDLYSSESLEQDLPGHLLRYPIGISEEGEITEVPGFEFFPDTKARVLGGKSDYMPPILTT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0847 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Alju11g0847 808 FunFam Phospholipase D delta 200 443 - -
Alju11g0847 808 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Alju11g0847 808 Gene3D Endonuclease Chain A 479 700 - -
Alju11g0847 808 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Alju11g0847 808 CDD PLDc_pPLDalpha_1 200 377 - -
Alju11g0847 808 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Alju11g0847 808 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
Alju11g0847 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju11g0847 808 SUPERFAMILY Phospholipase D/nuclease 150 445 - -
Alju11g0847 808 SMART pld_4 653 680 IPR001736 GO:0003824
Alju11g0847 808 SMART pld_4 325 363 IPR001736 GO:0003824
Alju11g0847 808 CDD PLDc_pPLDalpha_2 491 700 - -
Alju11g0847 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Alju11g0847 808 CDD C2_plant_PLD 2 147 - -
Alju11g0847 808 Gene3D C2 domain 6 156 IPR035892 -
Alju11g0847 808 Gene3D Endonuclease Chain A 199 442 - -
Alju11g0847 808 SMART C2_3c 9 123 IPR000008 -
Alju11g0847 808 SUPERFAMILY Phospholipase D/nuclease 439 738 - -
Alju11g0847 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Alju11g0847 808 FunFam Phospholipase D 466 699 - -
Alju11g0847 808 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Alju11g0847 808 Pfam C2 domain 8 126 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0847 Alju-ChrAlju11 10075735 10079025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0847 1 808 Phospholipase D Gene Family (Wang group) AT3G15730 81.381 0.0 1407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0847 11 10075735 10079025 Alju05g1520 05 45440980 45445464 CCT
Alju05g1520 05 45440980 45445464 Alju11g0847 11 10075735 10079025 ECH
Alju08g0800 08 6014866 6018772 Alju11g0847 11 10075735 10079025 ECH
Alju11g0847 11 10075735 10079025 Alju11g0847 11 10075735 10079025 ECH