Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0794 ATGTCTTCTCCGGAGAATCAACCGCAAGATTCCGCCGTCGAGCTCAACTTCAACGACACCGAGCTCACCTTGGGCCTTCCCGGCGCCGTCAAAACCGGTTCCAAACGTGGATTCTCCCACACCCTTGAAGCCTCCTCCAATAATGTCCACACCTCAACATCTGCTAAATCCCCCGCACAAAAGGCACAGGTGGTGGGGTGGCCGCCGGTGAGGGCGAGCAGGAAGAGCGTGATGAAGAAATGCAAGTATGTGAAGGTGGCGCTGGACGGAGCTCCATATCTGAGAAAAGTAGATCTTGAAATGTATCAGAGTTATGATCAGCTTCTCAGCTCCTTAGAAACCATGTTTGCCTGCTTAACCATCCGGAATGATTTGAATCAGAAGAATTATGAGCGTGGAAAGAATAATAATGGAGGGGAATACGTACCCACTTTTGAGGACAAAGATGGTGACTGGATGATGGTTGGAGATGTCCCCTGGAACATGTTTGTTGAATCCTGCAAAAGAATAAGGTTGATGATGAGTTCTGAGGAGGCTACTCCTGTGTTAGGTGCGACAAGAGGTTCATCAGAGTGA 576 0.4913 MSSPENQPQDSAVELNFNDTELTLGLPGAVKTGSKRGFSHTLEASSNNVHTSTSAKSPAQKAQVVGWPPVRASRKSVMKKCKYVKVALDGAPYLRKVDLEMYQSYDQLLSSLETMFACLTIRNDLNQKNYERGKNNNGGEYVPTFEDKDGDWMMVGDVPWNMFVESCKRIRLMMSSEEATPVLGATRGSSE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0794 191 FunFam Auxin-responsive protein 76 185 - -
Alju11g0794 191 Gene3D - 76 185 - -
Alju11g0794 191 Pfam AUX/IAA family 79 178 IPR033389 -
Alju11g0794 191 ProSiteProfiles PB1 domain profile. 81 179 IPR000270 GO:0005515
Alju11g0794 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 15 178 IPR003311 GO:0005634|GO:0006355
Alju11g0794 191 SUPERFAMILY CAD & PB1 domains 73 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0794 Alju-ChrAlju11 9432222 9433155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0794 84 177 B3 DNA Binding Superfamily AT2G46530 35.106 4.65e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju11g0794 AUX_IAA 5.7e-43 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0794 11 9432222 9433155 Alju11g0794 11 9432222 9433155 ECH