Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0793 ATGGAAAAAGATGGTGGCTTGGGGCTTGAGATCACAGAACTGAGATTGGGTCTTCCTGGGAGGGAGGAGGAGGGGAAGAAGAAGAAGAATGAGAAGAAGAGGCTGTTCTCGGAGATTGATGATGATCATGAGGAGGATGGCTGCGGCGGTGGAGATTATCAGAACAGCTCGTCGGCTGGTGGCGATGGTGACCGGAAGGTGGCAGCAGTGGTGGGGTGGCCGCCGGTGTGCTCGTACAGGAGGAAGAATAGCATGAACAATAATGAAGGGTTGAAAATGTACGTGAAAGTGAGCATGGATGGAGCTCCGTTCTTGCGCAAAATTGACTTGGAAAAGCTTAAGGGTTACTCTGAACTCGCTCTCGCCTTGGAAAAGCTCTTTGGTTGCTATGGAATCAAGGAGGCGTTGAAGAATGGAGACAAAAGCGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATGGAGACATGCAAGAGGTTGAGGATAATGAAGAAATCAGACGCAAACGGATTTGGTGTGTCACCAAAAGGGTCTCTAAAAGGATATATAGAAGGCGTCACCAACTGA 606 0.4851 MEKDGGLGLEITELRLGLPGREEEGKKKKNEKKRLFSEIDDDHEEDGCGGGDYQNSSSAGGDGDRKVAAVVGWPPVCSYRRKNSMNNNEGLKMYVKVSMDGAPFLRKIDLEKLKGYSELALALEKLFGCYGIKEALKNGDKSEHVPIYEDKDGDWMLVGDVPWEMFMETCKRLRIMKKSDANGFGVSPKGSLKGYIEGVTN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0793 201 FunFam Auxin-responsive protein 87 188 - -
Alju11g0793 201 Gene3D - 86 189 - -
Alju11g0793 201 MobiDBLite consensus disorder prediction 1 64 - -
Alju11g0793 201 ProSiteProfiles PB1 domain profile. 92 180 IPR000270 GO:0005515
Alju11g0793 201 MobiDBLite consensus disorder prediction 16 41 - -
Alju11g0793 201 Pfam AUX/IAA family 60 184 IPR033389 -
Alju11g0793 201 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 182 IPR003311 GO:0005634|GO:0006355
Alju11g0793 201 SUPERFAMILY CAD & PB1 domains 82 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0793 Alju-ChrAlju11 9412910 9416273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0793 96 180 B3 DNA Binding Superfamily AT4G23980 44.706 1.45e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju11g0793 AUX_IAA 1.9e-44 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1589 05 46490231 46492650 Alju11g0793 11 9412910 9416273 CCT
Alju11g0793 11 9412910 9416273 Alju11g0793 11 9412910 9416273 ECH