Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0754 ATGTATCTTCTAACAGTTAACCTCACCAGAATCATGAGAAAGATCTTATCAGATGGGGCCAAGATCAGTAGAGATGTTAAGGAGTTTCGGAGAGATTGCCCAATAGAATTTATACTTTGCATTACCTCCGGAGTGTCTGAGAAGTGCAAGCAAGATGGCCGCAAAATCATCATGGGACGATATTATCCACTCCTTGAACATGTTCGGAATATGAATGATTACGAGAAAATGGTTGTGAGATATTTTGAGAATTTTCACACTTCCGTTAATTTACTGTCATCTGTCATGTCCATATATGTTTGA 303 0.3828 MYLLTVNLTRIMRKILSDGAKISRDVKEFRRDCPIEFILCITSGVSEKCKQDGRKIIMGRYYPLLEHVRNMNDYEKMVVRYFENFHTSVNLLSSVMSIYV 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0754 100 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Alju11g0754 100 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 58 IPR003958 -
Alju11g0754 100 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 60 IPR027113 GO:0001228|GO:0006355|GO:0016602
Alju11g0754 100 SUPERFAMILY Histone-fold 7 60 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0754 Alju-ChrAlju11 8929722 8930024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0754 2 59 CCAAT-HAP3 Transcription Factor Family AT4G14540 46.552 2.37e-11 55.1