Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju11g0753 | ATGCTGGCAGAGAGAAAAGATGAAGGATTTCTGCCAAGATTTCTTGCGAGCAGCTGGGGAAGAGAGTTCGTCGCCGGAGGATTTGGAGGCATTGCCGGAATAATCTCCGGTTACCCACTTGACACCCTCCGCATCCGTCAACAAAGCTCTAACAAAGGCTCTGCTTTTAGCATTCTCAGACATGTGGTGGCCAAGGAAGGACCATTCTCTCTGTACAGAGGCATGGCTGCTCCTTTAGGCTCTATCACTTTTCAGAATGCCATGGTATTTCAAACCTACGCAATTTTCTCAAGAGCATGTGACTCATCAGTTGCAGCCACCGACCCTCCGTCGTACAAGGGCGTTGCTCTCGGAGGATGCGCCACCGGAGCCGTACAAAGCGTCCTCCTTTCACCAATAGAACTGGTCAAGATACGCCTCCAGCTCCAAAACACAAGTAATGTCACAGAATCTCACAACGGTCCCTTACAAGTAGCCAAAACCCTATGGAAGCAAGAAGGTCTAAAGGGAATTTACAGAGGTCTAGGTATAACTGTGCTCAGAGAAGCACCTTCCCATGGCTTCTACTTCTGGACCTATGAGTACATGAGAGAAAAACTGCGTCCAGGTTGCAGAAAAAGTGGAGAAGAAAGCTTGAACAACGTGTTAATGGCAGGAGGTCTAGCTGGAGTAGCGAGCTGGGTTTGTTGCTATCCTTTGGATGTTATAAAGACGAGACTTCAAGCTCAAACACCATCTTCAGTGAAGTACAGAGGCATTTTTGATTGCGTCAGAAAGAGTGTGAAAGAAGAAGGGCACTCTGTGTTATGGCGAGGTTTAGGAACTGCTGTTGCTAGAGCTTTTGTTGTGAATGGGGCTATATTTGCTGCTTACGAGATTTCTCTGAGCTCCTGGGCTGTTTCGACAAGGATAAATTTTGGATCCGTTTGCTGCATTAAATACATTTCTCCAATCAAATCTTATCAATCGGGACCCTTCGCTACGTCGTCGTTTCTGTTTGCTTGGCTAAAACCTCGCACGTTCCTTCTGTTGCCACATGCCGATCCCAGTCTCTCCTCCTTCAAGTTGCCTCATCATTTCAATATCTCACGATTCATTTCTTCCGAGTTCCTATATCTTCGGTTCTACTCTACAGAATCTTTTAGCATCCACTGTAGTTCTTCAGCTCTGTCACGCTTTCTTCTTTCCCCTTTTTTATATTCTCCTCAGTTTCCATTGAGCTCATTGTCTGTGATAACTTTGCGGATAAGGATTCCGATCGGTTTGGGGAAGGAATGCTCTGATCGGAGCTGGATTTGA | 1299 | 0.4634 | MLAERKDEGFLPRFLASSWGREFVAGGFGGIAGIISGYPLDTLRIRQQSSNKGSAFSILRHVVAKEGPFSLYRGMAAPLGSITFQNAMVFQTYAIFSRACDSSVAATDPPSYKGVALGGCATGAVQSVLLSPIELVKIRLQLQNTSNVTESHNGPLQVAKTLWKQEGLKGIYRGLGITVLREAPSHGFYFWTYEYMREKLRPGCRKSGEESLNNVLMAGGLAGVASWVCCYPLDVIKTRLQAQTPSSVKYRGIFDCVRKSVKEEGHSVLWRGLGTAVARAFVVNGAIFAAYEISLSSWAVSTRINFGSVCCIKYISPIKSYQSGPFATSSFLFAWLKPRTFLLLPHADPSLSSFKLPHHFNISRFISSEFLYLRFYSTESFSIHCSSSALSRFLLSPFLYSPQFPLSSLSVITLRIRIPIGLGKECSDRSWI | 432 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju11g0753 | 432 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 110 | 199 | IPR018108 | - | |
| Alju11g0753 | 432 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 210 | 297 | IPR018108 | - | |
| Alju11g0753 | 432 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 20 | 99 | IPR018108 | - | |
| Alju11g0753 | 432 | SUPERFAMILY | Mitochondrial carrier | 19 | 292 | IPR023395 | - | |
| Alju11g0753 | 432 | Pfam | Mitochondrial carrier protein | 18 | 98 | IPR018108 | - | |
| Alju11g0753 | 432 | Pfam | Mitochondrial carrier protein | 214 | 293 | IPR018108 | - | |
| Alju11g0753 | 432 | Pfam | Mitochondrial carrier protein | 116 | 200 | IPR018108 | - | |
| Alju11g0753 | 432 | PRINTS | Mitochondrial carrier protein signature | 172 | 190 | IPR002067 | GO:0055085 | |
| Alju11g0753 | 432 | PRINTS | Mitochondrial carrier protein signature | 125 | 143 | IPR002067 | GO:0055085 | |
| Alju11g0753 | 432 | PRINTS | Mitochondrial carrier protein signature | 219 | 241 | IPR002067 | GO:0055085 | |
| Alju11g0753 | 432 | PRINTS | Mitochondrial carrier protein signature | 22 | 35 | IPR002067 | GO:0055085 | |
| Alju11g0753 | 432 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 17 | 297 | - | - | |
| Alju11g0753 | 432 | Gene3D | Mitochondrial carrier domain | 20 | 303 | IPR023395 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju11g0753 | Alju-ChrAlju11 | 8924401 | 8928900 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju11g0753 | 10 | 295 | Antiporters | AT1G79900 | 72.125 | 8.76e-138 | 395 |