Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0718 ATGACACTTCTCCTCACTGAATCTCCTGTCTCCTCTGAAACTTGTTCATCATCTTCCTCCTCTGATTCCAAATCTCAATCACAACACACCACCACCAGACCTGCCAAAAGACCCCGACCTTCTCCTTCTACTTCTGCGCCCTCATCTTCTTCTTCGTCTTCTTCTTCTGATTCTTCCGGCAAGCTCCCGCACTACCATGGCGTCAGAATGCGAAGCTGGGGCAAATGGGTGTCCGAGATTCGCGAGCCACGCAAGAAGTCTCGCATCTGGCTCGGCACTTTCGCCACTCCGGAAATGGCCGCTCGAGCCCACGACGTCGCCGCCCTCTCCATCAAAGGCAAATCTGCCATTCTCAACTTCCCTCAGATTGCCGCCCTCCTTCCCAGACCCACCACGTGCTCCCCAAGTGATATCCAAACCGCTGCTTCCGCCGCCGCCGCCATGGTCAAGTTCGACACCGTGCAGGCCTCAGAAGCCTCCGGATCACAGTCATCACCGTCGTCAGAGTCGACAGAGTCTTCAGAGCTGAGTGAGATAGTGGAATTGCCGACTATAGAAGAAGAGAGCTTCCAATCTGCCGAGTCAATGACCGAGTTCTTATGGATAGACTCGGCAGATAGTTGGGTGTTTCCGGGTACGGGTACGGGTATGGGTATGGGTTCGGATTATTCGGAACTGATGATGAGCTCCATTTTCTCCCAGCAATTCTCAGAGGAGATGCCACTCTGGGATTAA 735 0.5374 MTLLLTESPVSSETCSSSSSSDSKSQSQHTTTRPAKRPRPSPSTSAPSSSSSSSSSDSSGKLPHYHGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGKSAILNFPQIAALLPRPTTCSPSDIQTAASAAAAMVKFDTVQASEASGSQSSPSSESTESSELSEIVELPTIEEESFQSAESMTEFLWIDSADSWVFPGTGTGMGMGSDYSELMMSSIFSQQFSEEMPLWD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0718 244 MobiDBLite consensus disorder prediction 1 65 - -
Alju11g0718 244 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Alju11g0718 244 Gene3D AP2/ERF domain 64 123 IPR036955 GO:0003700|GO:0006355
Alju11g0718 244 MobiDBLite consensus disorder prediction 1 61 - -
Alju11g0718 244 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Alju11g0718 244 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Alju11g0718 244 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Alju11g0718 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 42 191 - -
Alju11g0718 244 CDD AP2 63 121 IPR001471 GO:0003700|GO:0006355
Alju11g0718 244 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Alju11g0718 244 MobiDBLite consensus disorder prediction 157 178 - -
Alju11g0718 244 FunFam Ethylene-responsive transcription factor 2 64 122 - -
Alju11g0718 244 SUPERFAMILY DNA-binding domain 64 121 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0718 Alju-ChrAlju11 8559073 8559807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0718 41 211 AP2-EREBP Transcription Factor Family AT5G11590 53.552 7.50e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju11g0718 AP2 2.4e-13 CL0081