Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0695 ATGACGCGGCGGTGCTCTCACTGCAGCAATAACGGGCATAACTCCCGAACTTGCCCCTCCCGGAGTGGAAGTGCCGGCGGCGGAAGCGCGGGAGGTGTGAAGCTATTCGGTGTTAGACTCACCGATGGATCGATCATTAAAAAGAGCGCGAGTATGGGGAATCTGTCGGCCCATTACTATTCTTCTTCGTCCGCCGCTGGATCACCGAATCCCGAGTCGCCTTGCTCTGACCCTCTCCGAGACTTGGGTCATGAGCAAGACGGGTATTTGTCCGATGATCCCTCTCATGCCTCCAGTTCCGCGAACCGTCGTGGAGAAAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACATAAGATGTTTTTAATTGGTCTCCAGAAGCTGGGTAAAGGAGATTGGCGAGGCATATCTCGCAATTTTATTGTGTCAAGAACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTTATCCGGCAGAGTAATGGTACCCGGAGAAAGAGGCGTGCCAGTCTTTTTGACATGGTTCCAGATGTGGCTTCTGATCCACCTTCAGTGCCGGAAGAACAAGTATTACTGCCACCTTTCAATAACTCTCGACATGGTAGTGCAAATTTACAACCATCATTAGATCTCTCCCTCAAGTCAGACTATGAACCCATGGAAACTAATTGTGAAGAAAATGTGAAAGAGCCCAATGAAACTATGATTAGATCAAGTGGATTGACACCAGTGGCTAACGGATTCATGCCAACATATGTACCTGTTGCATTTTCCTTATGGCCATCAAATGCAGCTCCCTTTGAAGAAGTTAAGGAAGCTGAGACAGCTCATCATCAGGTCCTTAAGCCAATCCCAATCGTTCCAAAGGAGCCAGTCAATGTTGATGAGCTTGTGGGCATGTCTCAGCTGAGTTTGGGGGAAACACAGAAAGGTGATAGAGAGCCTTCTCCACTTTCTTTGAAGTTGGTGGGAGAGCCCTCAAGGCAATCAGCATTCCATGCAAATGCTTCAGTTGGTGGTTCAGATTTAAACAATGGCAAGAACAGTGCAATTCAAGCAGCTTAA 1068 0.4766 MTRRCSHCSNNGHNSRTCPSRSGSAGGGSAGGVKLFGVRLTDGSIIKKSASMGNLSAHYYSSSSAAGSPNPESPCSDPLRDLGHEQDGYLSDDPSHASSSANRRGERKKGVPWTEEEHKMFLIGLQKLGKGDWRGISRNFIVSRTPTQVASHAQKYFIRQSNGTRRKRRASLFDMVPDVASDPPSVPEEQVLLPPFNNSRHGSANLQPSLDLSLKSDYEPMETNCEENVKEPNETMIRSSGLTPVANGFMPTYVPVAFSLWPSNAAPFEEVKEAETAHHQVLKPIPIVPKEPVNVDELVGMSQLSLGETQKGDREPSPLSLKLVGEPSRQSAFHANASVGGSDLNNGKNSAIQAA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0695 355 Gene3D - 113 162 - -
Alju11g0695 355 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Alju11g0695 355 Pfam Myb-like DNA-binding domain 112 157 IPR001005 -
Alju11g0695 355 SMART sant 109 159 IPR001005 -
Alju11g0695 355 FunFam transcription factor MYB1R1 111 162 - -
Alju11g0695 355 SUPERFAMILY Homeodomain-like 107 161 IPR009057 -
Alju11g0695 355 MobiDBLite consensus disorder prediction 1 24 - -
Alju11g0695 355 MobiDBLite consensus disorder prediction 59 112 - -
Alju11g0695 355 PANTHER TRANSCRIPTION FACTOR KUA1 3 283 - -
Alju11g0695 355 CDD SANT 112 157 IPR001005 -
Alju11g0695 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 161 IPR017930 -
Alju11g0695 355 MobiDBLite consensus disorder prediction 1 30 - -
Alju11g0695 355 MobiDBLite consensus disorder prediction 305 355 - -
Alju11g0695 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Alju11g0695 355 MobiDBLite consensus disorder prediction 331 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0695 Alju-ChrAlju11 8279324 8283140 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju11g0695 Myb_DNA-binding 2.5e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0695 11 8279324 8283140 Alju11g0695 11 8279324 8283140 ECH