Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0692 ATGACTTTTTTCTTGAGGCCTCACTTGTATTTGCTTTACTTTCTTCTCTTCCTTCTTAACCTCCACTCCATTTCTTCGTATACCTTACCCTTGGATTGTAAGGACACATCTCGTATATGCACTTCCTTCTTGGCCTTTAAACCTCAACCAAATCAAACCTTAGCCATAGTTCAGAGCATGTTTGATGTATTGCTTAAAGACATTACTGTTGAACGCAACGGTCGGGACTACCTATTTATAAAAAAGAACTGTTCTTGTGTAGCTGGTACAAACAAATACGTATCAAGCACCACTTATACTGTAAAATCCAATGAAGGGTTGGTGTATGATTTGGTTATGAAGGCCTATGATGGGCTTGGTTTCTTGCCCAAAACGACCAGGAGGGCTGAAAACGGCACCGTTATAACATTGAAGTTGTTTTGTGGTTGCTCCAGTGGACCCTGGAACTATATGATGAGTTATGTGATGAGAGAAAGTGATAGCATTGAATCTCTAGCGAGTCGGTTTGGAGTTAGTATGGATAGTATAGAGACAGTAAACGGAATCAACAATCCTGATAACATCACTGTGGGTTCTTTGTATTATATACCTCTTAATTCTGTTCCTGGTGAGCCATATACCCAGAAGAATGATGCTTCTGCAGCTCCAATATCTGTACCTGCCCCTTCTATTGACAATGTTTCTGCTAGTCAAGTCAGTCATGCTCATGCACCCTACGTATGGATCGTTGGGGGTTTAGGGATTGGGCTTGTCCTGATAATATTAAGCATAATTCTTTATTTCTGTGTGAGATCGTCCAATTGTTTTGCTGAAGCAAGGACAAGTCATGAAAAAGATGATGAAGGCAAGATATCTCACAAATTTCATGTCCTTCAAAATCCAAGTTTCTGCTGTGGTTCAGGAAGGTACATACAGGGCAAACCTGTAGAACAGCGGCAATCTGATCGTGAATCCAGAAACAACCAGATCATTGCTCCCAAAGTTTCAACTTTGGGGATTGGTGTCTTTGAAGTGGATAGCCCTGTTGTTTTCACATATGAAGAGATTTTTTCTGCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGTATTTATGGTTCTGTTTATCATGGCTTCCTTCGTGACCAGGATGTTGCTATTAAAAGAATGACTACTACAAAAACTAAAGAGTTCTTGTCAGAGATGAAGGTCCTATGCAAGGTTCATCATGCAAATCTGGTAGAATTGATCGGCTATACTGCTAGTCACAATGAGCTCTTCCTTGTTTATGAATATGCCCAGAAGGGTTCACTTGGAAGCCATTTGCATGATCCACAGACAAAGGGTTCTTCCTCACTCTCTTGGATCATGAGGGTCCAGATAGCACTTGATGCTGCTAGGGGTGTTGAGTACATACATGAGCACACCAAAACCAATTATGTCCATAGAGATATCAAGACAAGCAACATCTTACTTGATGCTTCCTTTAGAGCAAAAATTTCAGATTTTGGGTTAGCAAAACTTGCTGGGAAAGCAAATGAAGAAGAAATTGCTGCCACCAAAGTTGTTGGGACGTATGGTTATCTTGCACCAGAATACTTGAGTAATGGCCGTGCTACGACCAAAAGCGATGTCTATGCATTTGGCATTGTTCTTTTTGAGATAATATCAGGGAAGGAGGCCACTATTCGGACAGAAGGTGCAATGCCAAAAAATCCTCAGAGACGTTCTCTTGTATCTATTATGTTGGCAGCTCTTAGGAACTCACCTGACTCAATGAGTATGTCTAGTTTGAGAAACCATATCGATCCTAATATGATGGACCTGTATCCCCATGATTGTGTATTTAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGAAGATCCCATATTAAGACCTGATATGAAACAAGTTGTGATTTCACTCTCACAGATCCTTCTGTCTTCTATTGAGTGGGAAGCAACTCTAGCAGGGAACAGCCAAGTATTCAGTGGGCTTGTTCAGGGAAGATAG 2001 0.4103 MTFFLRPHLYLLYFLLFLLNLHSISSYTLPLDCKDTSRICTSFLAFKPQPNQTLAIVQSMFDVLLKDITVERNGRDYLFIKKNCSCVAGTNKYVSSTTYTVKSNEGLVYDLVMKAYDGLGFLPKTTRRAENGTVITLKLFCGCSSGPWNYMMSYVMRESDSIESLASRFGVSMDSIETVNGINNPDNITVGSLYYIPLNSVPGEPYTQKNDASAAPISVPAPSIDNVSASQVSHAHAPYVWIVGGLGIGLVLIILSIILYFCVRSSNCFAEARTSHEKDDEGKISHKFHVLQNPSFCCGSGRYIQGKPVEQRQSDRESRNNQIIAPKVSTLGIGVFEVDSPVVFTYEEIFSATDGFSDSNLLGHGIYGSVYHGFLRDQDVAIKRMTTTKTKEFLSEMKVLCKVHHANLVELIGYTASHNELFLVYEYAQKGSLGSHLHDPQTKGSSSLSWIMRVQIALDAARGVEYIHEHTKTNYVHRDIKTSNILLDASFRAKISDFGLAKLAGKANEEEIAATKVVGTYGYLAPEYLSNGRATTKSDVYAFGIVLFEIISGKEATIRTEGAMPKNPQRRSLVSIMLAALRNSPDSMSMSSLRNHIDPNMMDLYPHDCVFKMAMLAKQCVDEDPILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0692 666 Gene3D LysM domain 148 206 IPR036779 -
Alju11g0692 666 Gene3D Transferase(Phosphotransferase) domain 1 429 652 - -
Alju11g0692 666 Gene3D Phosphorylase Kinase; domain 1 334 427 - -
Alju11g0692 666 Pfam Protein tyrosine and serine/threonine kinase 360 636 IPR001245 GO:0004672|GO:0006468
Alju11g0692 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Alju11g0692 666 SMART serkin_6 356 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0692 666 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 46 660 IPR044812 GO:0019199|GO:0045087
Alju11g0692 666 SUPERFAMILY LysM domain 152 197 IPR036779 -
Alju11g0692 666 SMART LysM_2 153 197 IPR018392 -
Alju11g0692 666 FunFam Kinase family protein 332 427 - -
Alju11g0692 666 ProSitePatterns Protein kinases ATP-binding region signature. 362 383 IPR017441 GO:0005524
Alju11g0692 666 ProSiteProfiles Protein kinase domain profile. 356 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0692 666 FunFam PTI1-like tyrosine-protein kinase 3 428 652 - -
Alju11g0692 666 Pfam LysM domain 154 192 IPR018392 -
Alju11g0692 666 SUPERFAMILY Protein kinase-like (PK-like) 335 638 IPR011009 -
Alju11g0692 666 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0692 Alju-ChrAlju11 8243174 8247514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0692 30 666 Receptor kinase-like Gene Family AT1G51940 64.806 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju11g0692 PK_Tyr_Ser-Thr 3.4e-50 CL0016