Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0681 ATGGAAAGGGCACCAAAGTTGAATCTGTCCTTAGGCTTACGTTTTGTTCTCTTCCAACTTCTCCTTCATCTCGGCAACACGATGCGAGATGGAAGGAATCTCACCACCAACGACCCCAATCCTGAATTTATTAGCATTGATTGTGGAGCAACTCATGACTACTTAGACGAGGAAATGGGCATATGGTATGAGACAGACACAAACTTTGTAGAAACTGGCACAAATTCTATGGTTCTCCCAAGCATCAACCTTGATTATCCTTATTTTGGGGGACTTCTAAGCACCTTGAGAAGCTTCCCGAAAGGAAACAGGAACTGCTACACTCTCAAACCAAAACAAGGCTCGCACCATACTTATCTAATTAGAGCTTATTTTGCATATGGTAATTATGATGGCAAAAACCAAACTCCAACCTTCGACTTGTACCTCGGCGTCAATCACTGGGACACTGTTAACTTGAGAAATAATTTTGATTATTACATTCCTGAGATTATTCATACTCCCACAGCTGACACTATTCATGTGTGCCTTGTGAAAACTGTTTTGGGAGTACCTTTCATTTCTGTGTTGGAGCTTCGACGGCTTAGCAATTTTATTTACCAAACTCCATCACCTTCTCAATCACTTTTAGTCGCTCGAGGAAGATTTGATCTTGGCCCCACCAGGTCCGCCACACACAGCAGGTACAAGGACGACATCTATGATCGTACATGGCTCAAAATCAATTATACGTACTGGATCAATAATAGCGATATAGATATTGATCCTGCAAGCACAAAAGATTCTTATAAATTACCAACAGAAGTATTGAAATCAGCTGCAGCCCAACCATTCAATGTTTCTGATCCAATAACGTTTGACTATGACTCAGGATGGAAAGACCTTGACAAGTCGTCCGGATATTATGTCTACTTTCACTTTTGGGAAATTCAGCAGCTTCCTCATGGGCAAAAAAGAATAATCAATATCACTGTTGATGATAAAAGCATTTTGCAGCCTGTAATTCTTGAATACTTGAAGCCACAAACCATTGTTCCTCAAAATGCAATTCCAGGCAATGTTCGTTTTAGTATTAGTGCAGCATCAGAATCCGATGCTCCTCCAATCCTCAATGCTTTTGAGGTTTACCAATTGATGTCTCCAATACCATCCCCAACTGACCAAAGAGACGGGCAAATAACTACCTCATTTTCACAACTTACAGAGTTAGAATCCCTAGATTTATCATTCAATGACTTGTCAGGCTCTATACCAGAATTTCTTAATGAACTGCCGAAGTTGAGAGTTCTTAACTTGAGTGGCAACAAGCTCACGGGTTCAATTCCTGGGTTTCTTAAAGAAATGTCATCATATGGAAATTTGGAATTGAGGTTGGAAGATAATCCTGGCCTTTGTCTGGATGGTTCATGCAAAAACCATAAGTTTGTTCTTGCACTTGTTGCGGCTTCTGTTTCTGCTTTGGTTGTAATTGTCCTGGTTTCTTTAGGAATATGGATCTTCAAAACCAAAAAATTAAAAGTGGTTATCACTGTTTCTACGAATGAAGAATCGTTGCGACCCAAAAATCGAGCAGTTTCTTACTCCAGAATTCTCAGAATCACTAATAATTTGCAAGACTTAATAGGAGAAGGAGGATTTGGAAAGGTTTATTATGGCACTCTAAGAGACAATACTCAAGTTGCTGTGAAGTTACTTTCTCAATCATCAATGCAAGGTTTCAAAGAATTTCGGTCCGAGGTGGAACTCTTGATGGTTATTCATCATAGGCATTTGGTTTCTCTGATTGGATACTGTGAAAAAGGCAGTGTGAGGGCATTAATTTATGAATATTTGGCTAATGGTAATCTCCAACAGCATTTATCAGTGGAGAACCCTAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGCTGCACACGGATTGGACTATTTGCATAATGGTTGTAAACCACCAATTGTCCACAGAGATTTAAAAACTTCCAACATCTTACTAAACGAAAAGATGCAAGCCAAGATTTCTGATTTTGGACTATCTCGAGCTTTTGCAAATGATATTGACACTCATGTATCAACTCGTCCAGCTGGCACATTAGGTTATCTTGATCCCGAGTGA 2121 0.3956 MERAPKLNLSLGLRFVLFQLLLHLGNTMRDGRNLTTNDPNPEFISIDCGATHDYLDEEMGIWYETDTNFVETGTNSMVLPSINLDYPYFGGLLSTLRSFPKGNRNCYTLKPKQGSHHTYLIRAYFAYGNYDGKNQTPTFDLYLGVNHWDTVNLRNNFDYYIPEIIHTPTADTIHVCLVKTVLGVPFISVLELRRLSNFIYQTPSPSQSLLVARGRFDLGPTRSATHSRYKDDIYDRTWLKINYTYWINNSDIDIDPASTKDSYKLPTEVLKSAAAQPFNVSDPITFDYDSGWKDLDKSSGYYVYFHFWEIQQLPHGQKRIINITVDDKSILQPVILEYLKPQTIVPQNAIPGNVRFSISAASESDAPPILNAFEVYQLMSPIPSPTDQRDGQITTSFSQLTELESLDLSFNDLSGSIPEFLNELPKLRVLNLSGNKLTGSIPGFLKEMSSYGNLELRLEDNPGLCLDGSCKNHKFVLALVAASVSALVVIVLVSLGIWIFKTKKLKVVITVSTNEESLRPKNRAVSYSRILRITNNLQDLIGEGGFGKVYYGTLRDNTQVAVKLLSQSSMQGFKEFRSEVELLMVIHHRHLVSLIGYCEKGSVRALIYEYLANGNLQQHLSVENPNVLKWNERLQIALDAAHGLDYLHNGCKPPIVHRDLKTSNILLNEKMQAKISDFGLSRAFANDIDTHVSTRPAGTLGYLDPE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0681 706 SUPERFAMILY Protein kinase-like (PK-like) 520 706 IPR011009 -
Alju11g0681 706 FunFam Os07g0541700 protein 611 699 - -
Alju11g0681 706 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Alju11g0681 706 SMART serkin_6 535 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0681 706 FunFam Leucine-rich repeat receptor-like protein kinase 512 610 - -
Alju11g0681 706 PANTHER OS07G0107800 PROTEIN-RELATED 391 706 - -
Alju11g0681 706 SUPERFAMILY L domain-like 391 472 - -
Alju11g0681 706 Pfam Protein tyrosine and serine/threonine kinase 537 699 IPR001245 GO:0004672|GO:0006468
Alju11g0681 706 Gene3D Phosphorylase Kinase; domain 1 517 610 - -
Alju11g0681 706 Gene3D Transferase(Phosphotransferase) domain 1 611 706 - -
Alju11g0681 706 ProSiteProfiles Protein kinase domain profile. 535 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0681 706 Pfam Leucine Rich repeats (2 copies) 401 442 IPR025875 -
Alju11g0681 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Alju11g0681 706 Gene3D Ribonuclease Inhibitor 390 514 IPR032675 -
Alju11g0681 706 PRINTS Leucine-rich repeat signature 424 437 - -
Alju11g0681 706 PRINTS Leucine-rich repeat signature 403 416 - -
Alju11g0681 706 Pfam Malectin-like domain 46 377 IPR024788 -
Alju11g0681 706 ProSiteProfiles Leucine-rich repeat profile. 426 448 IPR001611 GO:0005515
Alju11g0681 706 ProSiteProfiles Leucine-rich repeat profile. 402 424 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0681 Alju-ChrAlju11 8056008 8072219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0681 43 706 Receptor kinase-like Gene Family AT2G19230 42.935 2.05e-180 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju11g0681 Malectin_like 8.3e-83 CL0202