Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0675 ATGGACGGAGATCCAGATGCCCAGATGATGGTAAGTGGTGATGCTCGACTCCTTAGAGTTTGGAGATTACCCAGATCACTAATGCTTTCTCCGGGTTGCTGGCGAAGTAACTTGAGTTGGAATGAACTCAAAGGTCCAATTAATTCCACAACGTTTGGTGGAGAAGAAGAACAAGGGCAATTTGAGCATAAGGCATTTGAGTTTAAAGTGGCAGTGTCAAACATGAAGATTGCACCACCATTGACTCTGCATTTACTTGCTTTCTTCTTCATTCCTCTCCACAACTCAATCTTGGTAGCTTCAGACTCCAAAACCATCACTGATAATGATTTAGGCTACATAGGAATAGATTGTGGGGTTGAGGAGGCATACCAAGACAGCGAGAGCAACATGTGGTATAAACCAGATTCAGGTTTTGTTGAAACAGGCCAGAATCACAAATTACCATCAGATTTTAGTTTTTCTAAACCCCAAATGTCGAAGCAACTAAACACACTGAGAAGTTTTCCAGATGGAGAAAGGAATTGCTATACTCTGTCTCCCAAACAGGGGAGAAACAACAAGTACATAGTCAGAGCTTTCTTTGCTTATGGAAACTATGACTTGAAATACACTAAACCCATTTTTGATTTGTATCTTGGTGTCAATCGCTGGAAAACCATTGACTTTGATAATATTACATCGTATTATTCTGTTGAGGTCATTCTTGTTGCCTCAACAGACATCATAAGTGTGTGTCTTGTTAAAACAGGAAAAAGTGTTCCTTTTATATCCTCCTTGGAATTATGGTTTCTTGGTGATTATATTTATCCAATCTCCGGTTCTCTTCAGTTGGATCTCTTGACTCGGTCCACCCCCGGCCGCCAAGGAGACGACAGGTTCATCAGGTTTGAAGATGATACATATGGTCGTGTGTGGTTTAAAAGATCCTTTGGCAGTCTAAATATAACCAACACATCAGTAGACATTGATTTAAACGGACAACAGAATTCTAATAAACTGCCAACACAAGTATTGAAGACTGCAATAGAGTCACCAAGTCTGGACTCTTCCATGGAAATCTACCATGATCAACAGACTGATAGTTCCGACGAGTACTTCTGCTACTTTTACTTCTTTGAATTTAAGCAACAAGCAACAACTCAGAAAAGGATCATGGATATTACATTCAATGATAAGAGCATCCTCACGGAGCCTCTTACTACTCAACATCTGAAGCTGTTCCAAGTTGTTCATAATATCACACAAGTGAACTATCTTCGTATTTTGATCAAACCCACTCGGGAATCTGATTTACCAGCCATGATCAATGCTTTTGAGGTTTATAGAGGACTAAAACAGACCAATTCAGCAACTGATCAAGTTGATGTTGATGCGATTCGAGGAATAAAAACCATATATAACATCATAAATTGGCAAGGAGATCCATGCATTCCACCTAGTTTTACTTGGGAAGGGGTCACTTGCACATCTTATGCCAATCCAAGGGTCACTTCAATGGATTTATCATATAACAAACTGACAGGAGAAGTGCCTGAATATTTTGCACAGTTGCCAGATTTGGAAGTCCTTAATTTGACAGGGAATCAGCTCACAGGTTCAATCCCCAAATCACTATGGCTAAAGTCAAAAGCCTCTTTGTCACTTAGTTTGGAAGGAAATCCAGGTCTTTGTCTGGCAAAATCATGTGAGACAAAGAAGCATGCAACCCTCCTCGTTGCTTGTATAGCTGCATCCATAGCTCTTTTAGTATTGACCTTCCTTATTTATCTGACGAACATGAGAATCAAAAGGAAGAAACAAGGAGAATTTGAACTTCAAAAGAAATCAAAGAAACAAGTATTTTCTCTCAGAGAGGTTACTAGAATTACAAGTAACTTCAAAACTGTAATTGGGAAAGGAGGATTTGGAGATGTTTACCTTGGCACCCTGCAAGATGGTAGAGAAGTTGCAGTGAAGTTACTGTCGCAGACATCAAGGCAAGGATACAAGGAGTTTCACTCAGAGGCAGATTTGTTGACTTTTGTTCACCATAAAAACTTGGTCTCTTTTGTGGGTTACTGTGAAGAAGGTGATGTGAAAGCATTGATTTATGAATATATGGCAAAGGGGAATCTGCAACAGCTGTTGTCAGATACAAATGCAACTGTTTTGAAGTGGTTTGAGAGACTTCAAATTTCCGTGGATATTGCACTTGGATTGGACTATTTGCATTATGGTGTTAGGCCTCCCATAGTTCACAGAGACTTGAAGACCTCCAATATTTTGTTGAATGAGAATATGCAAGCCAAAATTTCTGATTTTGGACTGCTTCGCGGCTCTGGAAAGTCTTGCATAATTTATCTACCTGTGAAATCTGAAATAGTTACATTACGCACAGAACAATTTTCTGCTATATCAGCAGGTGATGTGGCCTTGTTTTGTATTGCATTAGTGAAAAATGCTGGTTGCTTAGGTTCAGCTAATGAAATGGTTTCATTAGACAGATAA 2490 0.394 MDGDPDAQMMVSGDARLLRVWRLPRSLMLSPGCWRSNLSWNELKGPINSTTFGGEEEQGQFEHKAFEFKVAVSNMKIAPPLTLHLLAFFFIPLHNSILVASDSKTITDNDLGYIGIDCGVEEAYQDSESNMWYKPDSGFVETGQNHKLPSDFSFSKPQMSKQLNTLRSFPDGERNCYTLSPKQGRNNKYIVRAFFAYGNYDLKYTKPIFDLYLGVNRWKTIDFDNITSYYSVEVILVASTDIISVCLVKTGKSVPFISSLELWFLGDYIYPISGSLQLDLLTRSTPGRQGDDRFIRFEDDTYGRVWFKRSFGSLNITNTSVDIDLNGQQNSNKLPTQVLKTAIESPSLDSSMEIYHDQQTDSSDEYFCYFYFFEFKQQATTQKRIMDITFNDKSILTEPLTTQHLKLFQVVHNITQVNYLRILIKPTRESDLPAMINAFEVYRGLKQTNSATDQVDVDAIRGIKTIYNIINWQGDPCIPPSFTWEGVTCTSYANPRVTSMDLSYNKLTGEVPEYFAQLPDLEVLNLTGNQLTGSIPKSLWLKSKASLSLSLEGNPGLCLAKSCETKKHATLLVACIAASIALLVLTFLIYLTNMRIKRKKQGEFELQKKSKKQVFSLREVTRITSNFKTVIGKGGFGDVYLGTLQDGREVAVKLLSQTSRQGYKEFHSEADLLTFVHHKNLVSFVGYCEEGDVKALIYEYMAKGNLQQLLSDTNATVLKWFERLQISVDIALGLDYLHYGVRPPIVHRDLKTSNILLNENMQAKISDFGLLRGSGKSCIIYLPVKSEIVTLRTEQFSAISAGDVALFCIALVKNAGCLGSANEMVSLDR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0675 829 SMART serkin_6 625 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0675 829 Gene3D Transferase(Phosphotransferase) domain 1 701 786 - -
Alju11g0675 829 Pfam Protein tyrosine and serine/threonine kinase 627 773 IPR001245 GO:0004672|GO:0006468
Alju11g0675 829 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
Alju11g0675 829 Gene3D Phosphorylase Kinase; domain 1 607 700 - -
Alju11g0675 829 SUPERFAMILY L domain-like 481 540 - -
Alju11g0675 829 FunFam Leucine-rich repeat receptor-like protein kinase 603 700 - -
Alju11g0675 829 Pfam Leucine rich repeat 495 540 IPR001611 GO:0005515
Alju11g0675 829 ProSiteProfiles Leucine-rich repeat profile. 520 542 IPR001611 GO:0005515
Alju11g0675 829 Gene3D Ribonuclease Inhibitor 463 557 IPR032675 -
Alju11g0675 829 SUPERFAMILY Protein kinase-like (PK-like) 610 777 IPR011009 -
Alju11g0675 829 ProSiteProfiles Protein kinase domain profile. 625 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0675 829 Pfam Malectin-like domain 116 443 IPR024788 -
Alju11g0675 829 PANTHER OS07G0107800 PROTEIN-RELATED 115 771 - -
Alju11g0675 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0675 Alju-ChrAlju11 7833708 7843717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0675 112 772 Receptor kinase-like Gene Family AT2G19230 39.515 1.36e-154 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju11g0675 Malectin_like 5.7e-80 CL0202