Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0625 ATGCCGATGAGTCGTGAACAAGAGAAGCGAGCGAAGCAGGAAAAACGCTCTGATGCTGCTGAGAAGGTTATTGTTGCCGTTAAGGCTTCAAAGGAAATTCCAAAGACTGCTCTGATTTGGTCTTTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTACTAGTAGTCGTTCCTTCACAAAGTTCAGGTAGAAGATTATGGGGTTTTCCGTTATTTGCTGGTGACTGTGCCAGTGGCCACAAGAAGTCTGCTTCAGGAACAACCTCAGCGCAGAAGTGTGATACTATCAACGATTCTTGTTCCCAGATGATCCTTCAGCTGCATGACGTCTATGACCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGTCTGCAGAGGCCAAGAAAGCCCATGTCAGTTGGGTCGTATTAGACAAGCATCTCAAAAATGAAGAAAAACGGTGCATGGAAGAGCTACAATGCAACATTGTAGTTATGAAGCATTCCCAACCAAAAGTACTCCGCTTGAATTTGGTTGGCTCGCGCAAAAAGGATCCTGAAGAAGCAGGCCAAGTACCTTCTGGGAAAGATGAGATGCATGGAAAGCAAACCAAAAAGAAGAATGATTGCTTGAATTCCATTAAAGGACCAGTTGTCACTCCAATTAGCAGCCCAGAGTTGGGGACACCGTTCACAGCAACTGAAGCAGGTACTTCATCAGTTTCAAGCTCCGATATAGGAACATCACCATATTTCATCCCAGAGACAAATGGTGAGTTGAAGAGGGAGGAAACGATCAAGGAAAATCAAGAACTTTATAATACTAATTCAGACACAGAGAGTGAAAATCTGTCCACATCCTCTGTAAGCCTGAGATTCCAGCCATGGATCACAGAATTACTTCGACATCAACAGTCATCACAGCGCACAGAGGAAGAACCAGAGAGAACATATGTTAAGCCTCATACATCTACAACCAGAGCTTTACTAGAAAAGTTCTCAAAGCTTGACAGAGAAGCTGGAATTGATATCTCAACCAGATGGACAACTGAGTTGGATTTCAGTGGAGATGTGAGAGAAACAATATCATTATCCAAAAATGCCCCTCCCGGACCCCCTCCATTATGCTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAGCCTCCAAAGTGGTTCAGCTATGCTGAGTTGGAGCTTGCAACTGGCGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTACATAGAGGAGTTCTTCCTGATGGACAAGTCATTGCCGTCAAGCAACATAAATTGGCCAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTTGAAGTCCTAAGCTGTGCTCAGCATCGAAATGTTGTGATGCTAATTGGGTTCTGTATAGAAGATAAGAGAAGGCTGCTGGTTTATGAATATATATGCTATGGATCACTAGATTCTCATTTATATGGGCGACAGCAAAAGCCATTAGAATGGTCAGCAAGACAGAAAATTGCAGTTGGAGCTGCACGAGGGTTGCGATATCTCCATGAAGAGTGCAGAGTTGGTTGCATCATCCACCGTGATATGCGGCCAAACAACATCCTCATCACCCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGAGACACAGGTGTTGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGACAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGAGTGGTATTGGTGGAACTTGTTACAGGACGGAAAGCTGTGGATCTAACTCGACCCAAGGGACAGCAGTGTCTCACTGAGTGGGCACGCCCACTGTTGGAAGAATGTGCCATAGAGGAACTGATTGATCCAAGGCTGGAAAATTGCTATTCAAGACAGGAGGTCAGTTGCATGCTGCATGCCGCATCATTATGCATTCGCCGAGATCCTCATTCCAGACCGCGCATGTCACAGGTTCTCCGAATACTGGAAGGTGACATGATCATGGAAACAAATTACATTTCACATTCCGGCTACGATGTGGGAAATCGGAGTGGCCGAATCTGGGCAGGGCAGCACCACTACAGTGGTCCCTTGTTAGAAGAAGAGTCGCCGGAATCGTTCAGTGGGAAGTTGTCCCTTGAGAAATACAGGACCCCCTCCCATTGGAAAATGGACAAGGTTATAAGGACTACACGTGAAGATATGTGA 2253 0.4478 MPMSREQEKRAKQEKRSDAAEKVIVAVKASKEIPKTALIWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPLFAGDCASGHKKSASGTTSAQKCDTINDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVSAEAKKAHVSWVVLDKHLKNEEKRCMEELQCNIVVMKHSQPKVLRLNLVGSRKKDPEEAGQVPSGKDEMHGKQTKKKNDCLNSIKGPVVTPISSPELGTPFTATEAGTSSVSSSDIGTSPYFIPETNGELKREETIKENQELYNTNSDTESENLSTSSVSLRFQPWITELLRHQQSSQRTEEEPERTYVKPHTSTTRALLEKFSKLDREAGIDISTRWTTELDFSGDVRETISLSKNAPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICYGSLDSHLYGRQQKPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEECAIEELIDPRLENCYSRQEVSCMLHAASLCIRRDPHSRPRMSQVLRILEGDMIMETNYISHSGYDVGNRSGRIWAGQHHYSGPLLEEESPESFSGKLSLEKYRTPSHWKMDKVIRTTREDM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0625 750 PANTHER OS01G0750732 PROTEIN 291 685 - -
Alju11g0625 750 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Alju11g0625 750 MobiDBLite consensus disorder prediction 307 322 - -
Alju11g0625 750 Pfam Protein tyrosine and serine/threonine kinase 411 676 IPR001245 GO:0004672|GO:0006468
Alju11g0625 750 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Alju11g0625 750 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 482 - -
Alju11g0625 750 Coils Coil 3 23 - -
Alju11g0625 750 MobiDBLite consensus disorder prediction 227 253 - -
Alju11g0625 750 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0625 750 MobiDBLite consensus disorder prediction 181 256 - -
Alju11g0625 750 Coils Coil 264 284 - -
Alju11g0625 750 CDD STKc_IRAK 413 679 - -
Alju11g0625 750 FunFam Dual-specific kinase DSK1-like 14 169 - -
Alju11g0625 750 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 483 686 - -
Alju11g0625 750 MobiDBLite consensus disorder prediction 181 211 - -
Alju11g0625 750 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
Alju11g0625 750 MobiDBLite consensus disorder prediction 305 326 - -
Alju11g0625 750 Gene3D Transferase(Phosphotransferase) domain 1 484 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0625 Alju-ChrAlju11 7050847 7054608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0625 387 696 Trihelix Transcription Factor Family AT1G70460 51.411 6.24e-99 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Alju11g0625 PK_Tyr_Ser-Thr 3.7e-41 CL0016