Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0548 ATGTGCTCCCCCTATTGTCGTTTTATCAGAAGGAGAGATACGACTTGCGATTTCGTCTTCGCCAGAGGCCTAAGCATCAAAACGATTAGGGCAAGTGAGAGTCGTCTGCTTAACTTCCTCCTGCTGCTTCCTGTCGTCGATCTCACAAGCCTTATTTCAAGGGCTATAAAACCCAAAAGTTCGTTGTCCTTTGGTTCGACTCTAGTCATGGACCTGGAGAGAGAGAGAATTAAAAATGGATGTCAGAAGATTCTGGAAGGAATAGATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTACACTCATTGGTGATGATGAGAGAAATAGCCCGTGGGGTTGTCGATGATAGAGATAGAAAGGTGACAAAGAATGACGTGATTAGTGTTTTGCGCAACAGTATCGAGAAAATGGTGTGTGCATCCAGGGACATTATTGAAGTAATAAGCAGGATGTCGTTTGAAGGCTTAGATGATCAAAGAATGCATTTAGTAGTGAGGATGAAAGAAATTGCGCATGGGATTGCTGATAAACAAGCAAGAGCTGCAATAACTAGGAATGACATACTTGCAGAACAAGTTGGAGTTGGTTACGATGGCATAGGTTATAGTCCCATGGCTGAGTCAGCAAGGACCAGCAATTGTGATGTCCTGATAGATGAGGGACAAGGCATGATAAATGAAAATGAGATGTTGGAGGTAGAACATGTTTTAGGACTTGAAAATGGAATAAATGAAGTACAGGAGTCCCTGTTGCCATCTTCCTTTCAGCAATTTCTTCTGTGGCCTCCGGATGATTGCATCACCTTAGAGTGGGTTCAAGACATGATGTTCACCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAGTTCTGCCACATCATGCCATCAATTTTGGTAGATAAATTGACCGATTCTGCTTGCAGTATACTACGTGAAGAGCCAAATTGTGTGGAGATCAATTGTCAAGGAGACGACTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTGTCTGATTTACTGTTTCTTTTCAAGCATCTTGGCATGCCTTCTGAGAGTCAGTTCTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGTATGGAGGTTTTTTTGGTCTTGCTAGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGGGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAGAAGGAGTTGCGGATAAAATATGGTGGCCAAGGTGAAGATGTATATAATAAATGCCTAGAGTGTTTCAAGGAACTTCCATTAGCTTCAGTTCTAGGTGGCTGTGTTTATACTACTCATGGGGGGCTTTTTCGTAGCATAAAAGCTGCTCCTTTGCGAAAGCCAAAGCGAAAGAAGACGCAAAGAGTGGATCTTGGATCTTTAACCGAGTTATCTGAAGTTAAAAGATCTTCTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGTGACATCCTTTGGTCAAAACCATCTAATAAGGATGGCTTGAGGGATAATACAGGTCGGAAATTAGGTCTATGGTGGGGTCCTGATTGCACTGAGACTTTCTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGACCCGATGCAAGGGTTGGTCAAGATGGTTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGATGGAGAATCAGGAAAACTATATACACTTTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAATGAAGGAGCATATGCAATATTGGAATCGCCTGATTTTGAAAGTCCTAGCTTTCACTCATTTAAATCTGTGGGAAGACCTAAGGTGGATCCTTATATTGATTATGATGCTGATGAAATGGACTTTAGCAAACTAGACTCTCAGCAAATGGCCTCAACCTCTGGTATTTCAGCTTCTCAAAGATCTTATCCAGTAGGGGTAACACCGGAGTTTGACTTTGCGGCATTGGGCATTTATAATGCCCCATCATGGAGTGTTCAGCTTCCTGATGGTTCAGGTGGGACCCAAGTTGTGCAGCTTCCTAGGGCTCCTGTGGTGGAAGGACTGCCTCTGCCTCAAAACATACAGGAACCTCACAAGGCTGCTTATGAGTATTTGTTTGAGCTCGTTGCTTCCTTAAAACTAATGCTTATGACAAGGGAGACTGATAACAGGTCGAATGAGTCGTCTTTGCGAAGTAGAGCTAGGCAACGAAAAGGAGGAAGCAATAACTAA 2274 0.4248 MCSPYCRFIRRRDTTCDFVFARGLSIKTIRASESRLLNFLLLLPVVDLTSLISRAIKPKSSLSFGSTLVMDLERERIKNGCQKILEGIDSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVISVLRNSIEKMVCASRDIIEVISRMSFEGLDDQRMHLVVRMKEIAHGIADKQARAAITRNDILAEQVGVGYDGIGYSPMAESARTSNCDVLIDEGQGMINENEMLEVEHVLGLENGINEVQESLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQKMLPSEFCHIMPSILVDKLTDSACSILREEPNCVEINCQGDDSRVIVVGDIHGQLSDLLFLFKHLGMPSESQFYVFNGNYVDKGAWGMEVFLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKELRIKYGGQGEDVYNKCLECFKELPLASVLGGCVYTTHGGLFRSIKAAPLRKPKRKKTQRVDLGSLTELSEVKRSSVDCPYEGPNILLSDILWSKPSNKDGLRDNTGRKLGLWWGPDCTETFLKQNKLKLIIRSHEGPDARVGQDGFGDMLCGYSLDHDGESGKLYTLFSAPDYPQFGKRRYNNEGAYAILESPDFESPSFHSFKSVGRPKVDPYIDYDADEMDFSKLDSQQMASTSGISASQRSYPVGVTPEFDFAALGIYNAPSWSVQLPDGSGGTQVVQLPRAPVVEGLPLPQNIQEPHKAAYEYLFELVASLKLMLMTRETDNRSNESSLRSRARQRKGGSNN 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0548 757 SUPERFAMILY Metallo-dependent phosphatases 291 624 IPR029052 -
Alju11g0548 757 PRINTS Serine/threonine phosphatase family signature 329 356 IPR006186 GO:0016787
Alju11g0548 757 PRINTS Serine/threonine phosphatase family signature 359 386 IPR006186 GO:0016787
Alju11g0548 757 PRINTS Serine/threonine phosphatase family signature 429 455 IPR006186 GO:0016787
Alju11g0548 757 PRINTS Serine/threonine phosphatase family signature 574 590 IPR006186 GO:0016787
Alju11g0548 757 PRINTS Serine/threonine phosphatase family signature 392 416 IPR006186 GO:0016787
Alju11g0548 757 MobiDBLite consensus disorder prediction 734 757 - -
Alju11g0548 757 Pfam Calcineurin-like phosphoesterase 329 548 IPR004843 GO:0016787
Alju11g0548 757 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 102 742 - -
Alju11g0548 757 Gene3D - 265 654 IPR029052 -
Alju11g0548 757 SMART pp2a_7 296 618 IPR006186 GO:0016787
Alju11g0548 757 ProSitePatterns Serine/threonine specific protein phosphatases signature. 393 398 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0548 Alju-ChrAlju11 5893721 5898521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0548 260 540 Calmodulin-binding Proteins AT5G63870 52.234 8.84e-98 303