Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0544 ATGGGTGGTTCTCGAAAGTGGTTGAAATCACTCATTTCTTCAAAAAAGCCCTCCCCAAATGATCGAGAAAAGACTGATGGAGATAAGAGCAAGAAGAAATGGAGGCTATGGAGGAACTCTTCTGAGATTATGGGACCATCCACGAAAGGCTCGACGAAGAAGAGAAAAGGCGCCGTATCAGACAAGCCGGAGTCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCACCAAAAGGTTTCTTGTTGATCAAGAAGGAATGGGCTGCCATTCGCATTCAAGCCCTGTTTCGAGGATTCTTGGCAAGAAGAGCTTTGAGGGCCTTAAGAGCAGTGGTGAGAATTCAATCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTGGTCAGAGTTCAAGCTCGTGTCAAAGCAAGGAGTGTGAGCTTATCTCCAGACAGGAAACACACTCAATCTCATTCTCTTAATCAGGCTGAGAGTGGATGGTGTGACATCCCAGGAAGCGTGGACGAAGTCAAAGCAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCGCTCTCTACACAGCAATCAAGAGCAAGTACTACTCCAAACACAAGAATCTCAAGGCCAATGTCTCCACTCAAGCATGACAATCTAGACAGTAGGAGCTTGTTAGAGAGGTGGATGGCAGCCAAGCCGTGGGAAAACAGGTTGAAATCAGAGAGATACTTTGATTCGCCGGACCGGACTCCATTATCAAGGAAAAGTGACAACTTTGTTCTCCCTAGAGCAAGAAAGAATGGTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACTAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATGTATGATGATAGCCCTCTTTCAGTTTCTTGTACATCCCCCGAGGTAAAGAGCGTTCCTAAACCGAGCTTCATGAATTTCACTGAATCAACCAAGGCTAAACAGAGAGCCTGCAAGTGTTCCTCTCTAAATGGAGATGCTAGAAGCACTACTTCTGGTTCTGATCCTTCTGCTAATTTTTGGAGAGACTGTTATGCAACTCCTCAAAGGGCTAGTAATCGAAGAAGATACTCCTCCCGGAGATGA 1188 0.4613 MGGSRKWLKSLISSKKPSPNDREKTDGDKSKKKWRLWRNSSEIMGPSTKGSTKKRKGAVSDKPESLSNDAFTAAMAAVVRAPPKGFLLIKKEWAAIRIQALFRGFLARRALRALRAVVRIQSIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQSHSLNQAESGWCDIPGSVDEVKAKLQMRQEAAIKRERAMAYSLSTQQSRASTTPNTRISRPMSPLKHDNLDSRSLLERWMAAKPWENRLKSERYFDSPDRTPLSRKSDNFVLPRARKNGVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPLSVSCTSPEVKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTTSGSDPSANFWRDCYATPQRASNRRRYSSRR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0544 395 SMART iq_5 113 134 IPR000048 GO:0005515
Alju11g0544 395 SMART iq_5 90 112 IPR000048 GO:0005515
Alju11g0544 395 MobiDBLite consensus disorder prediction 207 231 - -
Alju11g0544 395 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Alju11g0544 395 MobiDBLite consensus disorder prediction 354 372 - -
Alju11g0544 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 133 IPR027417 -
Alju11g0544 395 MobiDBLite consensus disorder prediction 207 227 - -
Alju11g0544 395 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Alju11g0544 395 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Alju11g0544 395 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
Alju11g0544 395 MobiDBLite consensus disorder prediction 16 38 - -
Alju11g0544 395 MobiDBLite consensus disorder prediction 1 65 - -
Alju11g0544 395 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Alju11g0544 395 Gene3D - 89 144 - -
Alju11g0544 395 MobiDBLite consensus disorder prediction 354 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0544 Alju-ChrAlju11 5860160 5862642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0544 1 383 IQD Protein Family AT1G72670 47.031 1.88e-94 287