Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0536 ATGGAGCCTCGAGTAGGGAACAAATTTCGTCTTGGCCGCAAGATTGGTAGCGGATCGTTTGGGGAGATCTATCTTGGTACTAATATTCAGACCAATGAAGAGGTCGCAATTAAGCTCGAAAATGTAAAGACCAAACACCCTCAGCTGTTGTATGAATCAAAGCTGTACAAAATACTGCAAGGAGGAACTGGAATCCCAAATGTTAAATGGTATGGTGTTGAAGGAGACTACAATGTGCTTGTGATGGATTTACTGGGGCCCAGTCTTGAAGATTTATTCAATTTTTGTGGTCGGAAATTGTCACTTAAAACTGTTCTAATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTGTTCATTCAAAATCATTTTTACATCGGGACATCAAGCCGGATAACTTTCTCATGGGTCTAGGAAGGCGTGCAAACCAAGTATACATTATTGACTTCGGTCTAGCAAAGAAATACAGAGACACTTCTACCCACCAGCATATTCCTTACAGAGAGAATAAGAATTTGACGGGAACTGCTAGATATGCTAGTATGAATACTCATCTGGGAATTGAGCAAAGTCGTAGGGATGACTTAGAGTCACTTGGATACGTTCTTATGTACTTTTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAAGCAGGTAATAAGAAGCAGAAGTATGAGAAGATCAGTGAGAAGAAAGTTTCAACTTCTATTGAGTCTCTCTGTCGTGGGTATCCCTCGGAATTTGCATCATACTTCCATTACTGTCGGTCTCTACGTTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGACTTTTCCGTGACCTATTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATCTTGAAGTATCAGCAATCCCATATCGCTACTCCTCCTGGACGTGCTATTGTTCCTGGTGCTGGACCAAGTTCTGGCATGCCACCAATTGTTGCAAATGCTGAAAGACATTCAGGTGGGGAAGATGGCAGACACACTGGTTGGTCTTCATCAGATCCTGCTCGTAGGAGAAATTCAGGACCTATTGGTAATGATGTCATGTTATCTAGACAAAAGGCCCCAGTTCCAAGTGACTCAAATATATCAAAAGATGGAATGTTGTCTGGTTCAAATTTTTTCCGCCCAAGTGGATCTTCAAGGCGAGCTGCTGTTTCTAGCAGCCGGGATGCAGCTACTGTTGGCAGTGAGACTGAGCCATCTCGCCCGCTTGCTGTTGATGCAAGTCCAGCAGCACTCCGTAAAATCTCTGCTGCTCCAAGAAGTTCGCCTCTTGTATCGGTGGAGCAGAGCAGAACATCATCTGGCAGGAGCCCGGCAAACATCAAAAATTTTGAGTCAACCCTGAGAGGCATTGAGAGCCTGCATTTCAATGACGAAAGGGTACAATACTAG 1425 0.4316 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVKWYGVEGDYNVLVMDLLGPSLEDLFNFCGRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSHIATPPGRAIVPGAGPSSGMPPIVANAERHSGGEDGRHTGWSSSDPARRRNSGPIGNDVMLSRQKAPVPSDSNISKDGMLSGSNFFRPSGSSRRAAVSSSRDAATVGSETEPSRPLAVDASPAALRKISAAPRSSPLVSVEQSRTSSGRSPANIKNFESTLRGIESLHFNDERVQY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0536 474 PANTHER CASEIN KINASE-RELATED 9 385 - -
Alju11g0536 474 MobiDBLite consensus disorder prediction 364 405 - -
Alju11g0536 474 MobiDBLite consensus disorder prediction 328 342 - -
Alju11g0536 474 CDD STKc_CK1_delta_epsilon 8 282 - -
Alju11g0536 474 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0536 474 MobiDBLite consensus disorder prediction 433 452 - -
Alju11g0536 474 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Alju11g0536 474 FunFam Casein kinase I isoform delta-like 1 308 - -
Alju11g0536 474 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0536 474 Gene3D Transferase(Phosphotransferase) domain 1 1 305 - -
Alju11g0536 474 MobiDBLite consensus disorder prediction 309 414 - -
Alju11g0536 474 FunFam Putative Casein kinase I 1 85 - -
Alju11g0536 474 MobiDBLite consensus disorder prediction 427 452 - -
Alju11g0536 474 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0536 474 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Alju11g0536 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0536 Alju-ChrAlju11 5790875 5795241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0536 7 219 EF-hand Containing Proteins AT2G17890 26.697 4.15e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Alju11g0536 Pkinase 3.3e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0536 11 5790875 5795241 Alju05g1860 05 50593342 50598162 CCT