Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0519 ATGTTGTTAGATGAAATTCTGATCATCTTTCAAGAGTCGCACTATAATTATCAACCAATGTTGAAGAGAGTATTTAAGTTTGCTTCAACAATACCTTTTCTGGTGCTTCTGCTACATATGGGATTGCCTGATTATGCTTCAATCTTGATCGTAGCAGCACTAATAGCTGCACTTTTATTCTTCAGCCTCGCCATGCTTGGTTGGTGTACCTACAGAAGCATTGATCTGATACAATCCATTCCATCCACAAGAACAAACTTTGATGACAAGTTCCAATCCTGGACCCCAAGCCTAGAGTCTCATTCCAAGACATTTCAGTACAGAGCTGCAGAAGCTGTACAAGGCACTGATCAGACTGAATGCATCATCTGTTTGGCACCCTTTGAAGAAGAAGACAGTGTGAGGCAGCTTCATAGCTGCAGACACATCTTTCATACAATTTGCATCGACACTTGGTTCGCCTCTCGTTCTGGCTGCCCTTTGTGCAGAACCCAGATAGACCATGTGCCACCTTCTCCAAATGTGATTGAGGAAGTGTCCATTTCCAGAAGGTCTGTGGCTTCAGAGGAAAATGACCCGAGTCGGACGGTCTTGTTCCTGGTCGGCTCCTGA 612 0.4444 MLLDEILIIFQESHYNYQPMLKRVFKFASTIPFLVLLLHMGLPDYASILIVAALIAALLFFSLAMLGWCTYRSIDLIQSIPSTRTNFDDKFQSWTPSLESHSKTFQYRAAEAVQGTDQTECIICLAPFEEEDSVRQLHSCRHIFHTICIDTWFASRSGCPLCRTQIDHVPPSPNVIEEVSISRRSVASEENDPSRTVLFLVGS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0519 203 SMART ring_2 121 162 IPR001841 -
Alju11g0519 203 Pfam Ring finger domain 120 163 IPR001841 -
Alju11g0519 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 168 IPR013083 -
Alju11g0519 203 SUPERFAMILY RING/U-box 108 171 - -
Alju11g0519 203 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Alju11g0519 203 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 46 169 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0519 Alju-ChrAlju11 5558215 5561046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0519 44 170 C3H Transcription Factor Family AT2G42360 30.827 1.89e-16 73.2