Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0518 ATGGAAACGGTTATGGCCAAAAATATATATATATATCTTTTCTGTTCGAATTCTTTCCCTTATGCGAGAAGTTTTTCTCTCAAATTCATCTGTCGAAAAGGTTGCTTCTTCAATCACTCACAGACACTGCTCTTAATCGGTCACTTTTTACAGTTGCAGCTACTTGGTGGACTCCTTTATCAATCACTCTCTCTGCCTTTATGTTTGTATATTGGAGGTGCATGTGAATTTTCCATGGAGATGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGGATTGATAGAAGTAGCTCTGCTTTGTCTTCACCGAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGGGGATTTCCTTGAGTTTGACCAGATTGAAATGGGTTTTGATGCGGACACTGGACTCCATGAAGGATGTTCATCAATTGAAAGGTCCTCCTCTGAGAAACTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCAAGGGAAATTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAAAAGGTCAAGGAAGAAGAGAAGCTTCGTTTGGCCTGTGGATCACGTGGTCTTTCTTATGTAAATGTAGACAGCCAGTGTTCTGCTGCTGACTTGCCTGTCATGGATGGGATAACTCAGTGTGATGCTTTCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAATATTGGAGGGTGTTCTAGACCTTCCGAAGGACAGATGGAAAGTGGATCATCTACCTCTGCTGTCTATTCTACTTTGAAGCCTGATTTTTTGATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAATGGTTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTATCAACAACAACTTTCATAGTTAAAGATAACAAATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGATGCAGTATTCTTCAAGGATGCTGCAGCTGGAGAAGAGGATATCAACTGTAACGATTCATCATGTGCTGAGGGTACTGGAAATGAAGATAATCAAGTTGTTTCTGGAAAGACACTGAGAAGTCATAAAGTGGAGCATGATTTGTGTTGTGAGAATCTCCAGATAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTGAAAATGAGTCCAAGGACAACAATCCTAGGTTGTTAAGTTCAAACCGAAGTATGGAATTTGAACATATCTCTCCAAACTCATACAATGGGCCTGCTAGGAATGATTTTTCAGAGGGGAGAACTCTCGTAACTAGGTTTGACTCTCTGGGAGGTTCTGGAATTTACATACCTTGTGTTTCCCGGATTCGAAGATGTCGTCCAAGGAAAAATATCACGCCCCTTATGAAATTCCATCAAAACAGTGGCATGGTGGAGGTTGCCAACTCAAGCAATAAGGTCCTTGGAGAGCATGATACTCAGGAAGATGAGGGATGCGATGAAGTTTTAAAATCAAGATCCACGCCTGCAAAATTCCAGCAGCGATTTACTGTTGAGCAGAAAGATGAACAGTCTCCAACACTGGACGGAATTGAACCACAGCAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCAATAGTTTAGATGACAACATAGTGACTGTCCCAACTTCAAAAGGCGGAATGAGAAGGAAACATCATAGAGCATGGACCCTTGCTGAGGTAATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGAAATTTGCTTAAAGCTAGCTCTGTGCAGGCAGCTTCGGATGAGGGTATGAACTCACGGAAGCATGGTACGGTCCCTATTCCCGAGCCGATTTTGGTACGAGTAAGAGAGCTTGCCAGGAAGAATTCTCAGGTACCTACAAGCTTCAGCTCAAGCAAACTAACAGCCTGTACTGGGGTTGCTCATGATGATGATAGATCAGAGTACTTGTAG 2208 0.4203 METVMAKNIYIYLFCSNSFPYARSFSLKFICRKGCFFNHSQTLLLIGHFLQLQLLGGLLYQSLSLPLCLYIGGACEFSMEMLVGIEDNDEGKLEDSGIDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDELIEVGDFLEFDQIEMGFDADTGLHEGCSSIERSSSEKLQLECSEDTAEADQGKLNARLQYIEQMLQKVKEEEKLRLACGSRGLSYVNVDSQCSAADLPVMDGITQCDAFFQEIIPSSAPSLNNSHSNQSQNIGGCSRPSEGQMESGSSTSAVYSTLKPDFLMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSTTTFIVKDNKLVKKCEEGSDGNVDAVFFKDAAAGEEDINCNDSSCAEGTGNEDNQVVSGKTLRSHKVEHDLCCENLQIEQRAAKRIRKPTRRYIEELSENESKDNNPRLLSSNRSMEFEHISPNSYNGPARNDFSEGRTLVTRFDSLGGSGIYIPCVSRIRRCRPRKNITPLMKFHQNSGMVEVANSSNKVLGEHDTQEDEGCDEVLKSRSTPAKFQQRFTVEQKDEQSPTLDGIEPQQESRLRKADLSSNSLDDNIVTVPTSKGGMRRKHHRAWTLAEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASSVQAASDEGMNSRKHGTVPIPEPILVRVRELARKNSQVPTSFSSSKLTACTGVAHDDDRSEYL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0518 735 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 614 673 IPR017930 -
Alju11g0518 735 SUPERFAMILY Homeodomain-like 620 675 IPR009057 -
Alju11g0518 735 MobiDBLite consensus disorder prediction 255 283 - -
Alju11g0518 735 Pfam Myb-like DNA-binding domain 621 669 IPR001005 -
Alju11g0518 735 MobiDBLite consensus disorder prediction 566 594 - -
Alju11g0518 735 MobiDBLite consensus disorder prediction 566 583 - -
Alju11g0518 735 CDD SANT_TRF 620 670 - -
Alju11g0518 735 ProSiteProfiles Myb-like domain profile. 622 669 IPR001005 -
Alju11g0518 735 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 100 716 - -
Alju11g0518 735 SMART sant 618 671 IPR001005 -
Alju11g0518 735 Gene3D - 609 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0518 Alju-ChrAlju11 5548699 5557938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0518 622 680 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 5.26e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju11g0518 Myb_DNA-binding 5.7e-07 CL0123