Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0513 ATGATGAATACTACTGCTGCTGCAAGAAATAGGCCCCCTTTCACAGCTTCTCAGTGGCAAGAACTTGAACAGCAAGCTCTTGTTTTCAAGTATATGGTCTCAGGGACACCAATCCCTCCTGATCTTGTTTACTCCATCAAAAGAAGCCTTGACTCTTCAATGTCTTCAAGGCTTTTTGCTCACCATCCTGGTGTGGGATGGGGATGTTTTGAGATGGGTTTTGGGAGAAAAATTGACCCAGAACCAGGAAGGTGCAGAAGAACAGATGGAAAAAAATGGAGATGCTCAAAGGAGGCATATCCAGATTCAAAATACTGTGAAAAACACATGCACAGAGGAAGAAACCGTTCAAGAAAGCCTGTGGAAGTTCCTTCATCAACAATAAGCAGCATTACCACAAACACCTCACAAGCAATCTCATCTTCATATGGCCTTAACAGAGGTCTTTCCATGATGAACAACAACCCAAACAACAACAACAACAATCTCTCATCAATCTCTTCTTCTTTCCCTTTCTCTGATTCATCATCATCCCAATATCCTTACCCGAATTCTTCTCTTAATCCCTTCTTTTACACCCATTCATCATCCTCATCCTCTTCAAGACCTCCTGATTCTGCTGATTTCTCATCTCATAATAGCAACACTACCCATCAGCTATTTTTGGACTCTGGATCTTATTCTCAGGATGAGAAAGACTATAGAAGTATTCACGTGGACGAAAGGGCATTTTTCCCAGAAGCTTCAGGGTCAGCTAGAAGCTTCCCTGATTCATACCACCACCAATTATCTATGAGCTCCTACAACAAATCATATTCAAACTCTCATCAGTTTCAAAGCCCCAATGATAATGACAGTAATCATCATCCAAGGCAACAAGAAGAAGAGCAACATTGTTTTGTTCTTGGCACTGACTTCAAATCACCAAGACCAAGCAAAAGTGAGAAAGAGACTAATAGTACTGAAACCACCCAGAGGCCACTTCACCACTTCTTTGGGGATCAGTGGACTCAGAAGAACACAGATTCTTGGCTTGATCTTGCTTCCAACTCCAGAATCCACACAGGTGATCATCATCATTACTCTGCTGCTTCTTTAATAAATGCCCCACCACCATTAAACTGTTCCATGGAACCCCAAAAAGAAAAAGAAAAAAACTTTTTTTTCCTCTTTGGATACGGCCAAGAGAGAGATAAAGATGAAAAGGGTTTCGTGGCTAGGGAGAAGCTTACCTTTGATAAAGCAGAGAGAGAGAGAGAGAGATGGGTGTTTATTAATGGAGGAATGTGCGGGCCACACATGGGATTTGTGTCTTTACTTTAA 1323 0.4165 MMNTTAAARNRPPFTASQWQELEQQALVFKYMVSGTPIPPDLVYSIKRSLDSSMSSRLFAHHPGVGWGCFEMGFGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVPSSTISSITTNTSQAISSSYGLNRGLSMMNNNPNNNNNNLSSISSSFPFSDSSSSQYPYPNSSLNPFFYTHSSSSSSSRPPDSADFSSHNSNTTHQLFLDSGSYSQDEKDYRSIHVDERAFFPEASGSARSFPDSYHHQLSMSSYNKSYSNSHQFQSPNDNDSNHHPRQQEEEQHCFVLGTDFKSPRPSKSEKETNSTETTQRPLHHFFGDQWTQKNTDSWLDLASNSRIHTGDHHHYSAASLINAPPPLNCSMEPQKEKEKNFFFLFGYGQERDKDEKGFVAREKLTFDKAERERERWVFINGGMCGPHMGFVSLL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0513 440 PANTHER GROWTH-REGULATING FACTOR 5 12 345 IPR031137 GO:0005634|GO:0006351|GO:0032502
Alju11g0513 440 MobiDBLite consensus disorder prediction 110 134 - -
Alju11g0513 440 MobiDBLite consensus disorder prediction 270 286 - -
Alju11g0513 440 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju11g0513 440 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju11g0513 440 MobiDBLite consensus disorder prediction 194 214 - -
Alju11g0513 440 Pfam WRC 80 122 IPR014977 -
Alju11g0513 440 MobiDBLite consensus disorder prediction 309 323 - -
Alju11g0513 440 MobiDBLite consensus disorder prediction 120 134 - -
Alju11g0513 440 MobiDBLite consensus disorder prediction 270 332 - -
Alju11g0513 440 ProSiteProfiles WRC domain profile. 79 123 IPR014977 -
Alju11g0513 440 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju11g0513 440 MobiDBLite consensus disorder prediction 287 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0513 Alju-ChrAlju11 5488952 5490656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0513 11 338 GRF Transcription Factor Family AT3G13960 39.674 1.92e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Alju11g0513 WRC 3.2e-21 No_clan