Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0493 ATGCCTCCTTCCAGAAGATTTCTCCTGAAAAGCTTCGTTCTTGGCTGTTTCAAAGCCAATCAATCTTCTTCAACCTTATGCTCTGCAACTAAAAATCACAATCATCATAAGAACAGTAAGTGCTTAGCCTCCAGTAAGGTTAGCTCAAGAAGATTGTGTCTTTCAGATCTGAGGAATTCTTCTTCTCTCTCTATCATGAGTGATCTTTCAAACTCTGTTCTGGGTTCAAATCTTCATATCTTCACCCTCAAAGAACTCAAAGAGATTACCCAAAATTTCTGCAAATCCAGTGTTGTTGGTGAAGGTGGGTTCGGTAAAGTTTATAAAGGCTTCATTGATGATAAGCTTAGGCCTGGTTTAGAGGTTCAAGTTGTTGCAGTTAAGGTTCTCGATTCAGATAGCAAACAGGGACACAGAGAGTGGTTGGCTGAAGTAATATTTCTGGGGCAACTGAAGCATCCTCACCTGGTGAACTTGATTGGATATTGCTGTGAAGATGAACACAGACTTTTGGTTTACGAATACATGGAGAGAGGCAATTTAGAGAACAAGCTTTTCAAGGGTTACTTAGCAGCCTTGCCTTGGCTCACAAGAATCAAGATAGCCATTGGGGCAGCAAAAGGACTTGCTTTCCTTCATGAAGAAGACCAACCTGTCATCTACAGAGACGTCAAAGCCTCAAACATCTTATTAGATGCAGATTACAATGCCAAGCTCTCTGATTTCGGTCTCGCCATAGATGGCCCAGAAGAAGACCAAATTCATATCACAACTCGTGTTATGGGTACTCATGGTTATGCTGCTCCTGAGTATATCACATCAGGGCATTTGACGACCATGAGCGATGTGTATAGCTTCGGGGTCGTTCTGTTAGAGCTGATCACAGGGAAGAGATCAGTGGATAAGAACCGTCCGATCAGAGAACAGGATTTGGTGGAATGGGCAAGACCATTGTTAAAGGACCCTAATAAGCTTGAAAGAATAATGGACCCAAGACTAGAGGGTCAATACTCTTATGAAGGGGCTAGAAAAATGGCGTCTTTGGCTCACCAATGTCTGAGTCAACAACCCAAATCCAGACCTTCCATGCGAGCCGTGGTTAAGACCTTAGAGCCACTTATGAACTTGACTGATATAATTGGCTACTTTGTCTATGTGGTCCCATGTGAAGAAAATAAACCAGTTCAATGTGGGAATGAGTGTGAACAAAAGATGGAGGAGGAGATGGAGAAGAAGACGACAACGACCACGACGGAGAAGAAGAAAAAGAAGAAGGTGGCTATGGAGGGTGTTCAGAGGAATCGAAAGGTTCAAAGACGAAGACGTCAGATTAAGTTGCTGAGATCATCTGATTCTGTTCATTCAGACACTGCTCTGTACAAAGTTCTTGGTTCTAGTCTTTATTCTCCAAAGCAAGCACCATAA 1425 0.4267 MPPSRRFLLKSFVLGCFKANQSSSTLCSATKNHNHHKNSKCLASSKVSSRRLCLSDLRNSSSLSIMSDLSNSVLGSNLHIFTLKELKEITQNFCKSSVVGEGGFGKVYKGFIDDKLRPGLEVQVVAVKVLDSDSKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEDQPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDQIHITTRVMGTHGYAAPEYITSGHLTTMSDVYSFGVVLLELITGKRSVDKNRPIREQDLVEWARPLLKDPNKLERIMDPRLEGQYSYEGARKMASLAHQCLSQQPKSRPSMRAVVKTLEPLMNLTDIIGYFVYVVPCEENKPVQCGNECEQKMEEEMEKKTTTTTTEKKKKKKVAMEGVQRNRKVQRRRRQIKLLRSSDSVHSDTALYKVLGSSLYSPKQAP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0493 474 FunFam Serine/threonine-protein kinase BIK1 60 175 - -
Alju11g0493 474 PANTHER OS01G0588500 PROTEIN-RELATED 40 373 - -
Alju11g0493 474 SMART serkin_6 93 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0493 474 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Alju11g0493 474 ProSiteProfiles Protein kinase domain profile. 93 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0493 474 Gene3D Phosphorylase Kinase; domain 1 56 175 - -
Alju11g0493 474 Pfam Protein tyrosine and serine/threonine kinase 97 370 IPR001245 GO:0004672|GO:0006468
Alju11g0493 474 CDD STKc_IRAK 99 373 - -
Alju11g0493 474 MobiDBLite consensus disorder prediction 408 453 - -
Alju11g0493 474 Gene3D Transferase(Phosphotransferase) domain 1 176 380 - -
Alju11g0493 474 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 176 379 - -
Alju11g0493 474 MobiDBLite consensus disorder prediction 408 434 - -
Alju11g0493 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Alju11g0493 474 SUPERFAMILY Protein kinase-like (PK-like) 68 371 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0493 Alju-ChrAlju11 5245893 5247755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0493 79 370 Glycoside Hydrolase AT3G07070 51.525 2.67e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju11g0493 PK_Tyr_Ser-Thr 2.3e-48 CL0016