Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0464 ATGTCGAAATTCCCCGACCCGGCGGCGGATGGCCGAAGGCTCGGCAAGGCGCCGGAGAGGTCTAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAGCGAGGTTCTGGATCTTTAAGCCTTGGAATGGCTGGTAAAATGGAATCTAGAGCAATTACGAAGGACTCGAAGACAAACCTGGAAAATCCTGATGATGCATTTAGACTAAATTCTTCAGCTATGGAATGTCTTCCTCAGTTCGTGGAAAACGCCTGTATCAAGAAGTCTGATTCGAGGTCAGACCCTGAACCCCAATTGACGATATTTTATGCTGGAAAAGTGTTAGTGTTTGATGCTTTTGCTCCTGAGAAGGCCACGGAGATCATGGAGCTAGCTACCAAATTAAGCTCTGATATTACTATTTCTGACATTAACAAGAACCTTCCAACTGCTTCTGCTGGTAAAGAAAATCAGGATGTGGCCAAAGTGCCTCAAAACAACGCTGCTCAGGAACAGGCAGTCCCTAAACCTGGACCTGCACCTATTAAATCAGACATGAGATACCCAAGAAGAGCTTCGCTTCTAAAGTTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAACAATCCAAATAGTCCAAAGCCGGATGGTGGCAGTTCAGGAGGGGACCCTGATCAAGGCCAGTCTTCCAAATCATTTGACCTTAACATCGCGACGGATCATCGCGGTGATAAAGATCACTACCCTCCTCAACGAAAGCTCTTTATATTTTTAGTCCTGGACATCACTGTAGGTGATTCCTCTGGTTTTCGGAGGCCTCACCCTCATCTTTCTTTCATTTCATTTTTTTCTCGAGGGTCAGACTCGGGACCGACCAAACCCTAA 894 0.4597 MSKFPDPAADGRRLGKAPERSNFTQYCNVLSQLLKEKRGSGSLSLGMAGKMESRAITKDSKTNLENPDDAFRLNSSAMECLPQFVENACIKKSDSRSDPEPQLTIFYAGKVLVFDAFAPEKATEIMELATKLSSDITISDINKNLPTASAGKENQDVAKVPQNNAAQEQAVPKPGPAPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNNPNSPKPDGGSSGGDPDQGQSSKSFDLNIATDHRGDKDHYPPQRKLFIFLVLDITVGDSSGFRRPHPHLSFISFFSRGSDSGPTKP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0464 297 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Alju11g0464 297 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 215 IPR040390 -
Alju11g0464 297 Pfam tify domain 101 129 IPR010399 -
Alju11g0464 297 Pfam Jas motif 187 209 IPR018467 -
Alju11g0464 297 MobiDBLite consensus disorder prediction 162 183 - -
Alju11g0464 297 SMART tify_2 96 131 IPR010399 -
Alju11g0464 297 MobiDBLite consensus disorder prediction 203 235 - -
Alju11g0464 297 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0464 Alju-ChrAlju11 4877126 4882766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0464 12 213 Tify Gene Family AT1G19180 35.371 3.03e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju11g0464 tify 1.6e-14 No_clan